ID M3ZNM9_XIPMA Unreviewed; 1278 AA.
AC M3ZNM9;
DT 01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 2.
DT 27-MAR-2024, entry version 58.
DE SubName: Full=High density lipoprotein binding protein {ECO:0000313|Ensembl:ENSXMAP00000003822.2};
OS Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC Xiphophorus.
OX NCBI_TaxID=8083 {ECO:0000313|Ensembl:ENSXMAP00000003822.2, ECO:0000313|Proteomes:UP000002852};
RN [1] {ECO:0000313|Proteomes:UP000002852}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RA Walter R., Schartl M., Warren W.;
RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000002852}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RX PubMed=23542700; DOI=10.1038/ng.2604;
RA Schartl M., Walter R.B., Shen Y., Garcia T., Catchen J., Amores A.,
RA Braasch I., Chalopin D., Volff J.N., Lesch K.P., Bisazza A., Minx P.,
RA Hillier L., Wilson R.K., Fuerstenberg S., Boore J., Searle S.,
RA Postlethwait J.H., Warren W.C.;
RT "The genome of the platyfish, Xiphophorus maculatus, provides insights into
RT evolutionary adaptation and several complex traits.";
RL Nat. Genet. 45:567-572(2013).
RN [3] {ECO:0000313|Ensembl:ENSXMAP00000003822.2}
RP IDENTIFICATION.
RC STRAIN=JP 163 A {ECO:0000313|Ensembl:ENSXMAP00000003822.2};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_014328915.1; XM_014473429.1.
DR AlphaFoldDB; M3ZNM9; -.
DR STRING; 8083.ENSXMAP00000003822; -.
DR Ensembl; ENSXMAT00000003827.2; ENSXMAP00000003822.2; ENSXMAG00000003787.2.
DR GeneID; 102228396; -.
DR KEGG; xma:102228396; -.
DR CTD; 794178; -.
DR eggNOG; KOG2208; Eukaryota.
DR GeneTree; ENSGT00900000141059; -.
DR HOGENOM; CLU_008532_0_0_1; -.
DR InParanoid; M3ZNM9; -.
DR OMA; DHAGQQV; -.
DR OrthoDB; 5489311at2759; -.
DR Proteomes; UP000002852; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd22405; KH-I_Vigilin_rpt1; 1.
DR CDD; cd22413; KH-I_Vigilin_rpt10; 1.
DR CDD; cd22414; KH-I_Vigilin_rpt11; 1.
DR CDD; cd22415; KH-I_Vigilin_rpt12; 1.
DR CDD; cd22416; KH-I_Vigilin_rpt13; 1.
DR CDD; cd22417; KH-I_Vigilin_rpt14; 1.
DR CDD; cd22418; KH-I_Vigilin_rpt15; 1.
DR CDD; cd22406; KH-I_Vigilin_rpt2; 1.
DR CDD; cd22407; KH-I_Vigilin_rpt3; 1.
DR CDD; cd22408; KH-I_Vigilin_rpt4; 1.
DR CDD; cd22409; KH-I_Vigilin_rpt5; 1.
DR CDD; cd02394; KH-I_Vigilin_rpt6; 1.
DR CDD; cd22410; KH-I_Vigilin_rpt7; 1.
DR CDD; cd22411; KH-I_Vigilin_rpt8; 1.
DR CDD; cd22412; KH-I_Vigilin_rpt9; 1.
DR Gene3D; 3.30.1370.10; K Homology domain, type 1; 14.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR004088; KH_dom_type_1.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR PANTHER; PTHR10627; SCP160; 1.
DR PANTHER; PTHR10627:SF34; VIGILIN; 1.
DR Pfam; PF00013; KH_1; 14.
DR SMART; SM00322; KH; 14.
DR SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 12.
DR PROSITE; PS50084; KH_TYPE_1; 14.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000002852};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00117}.
FT DOMAIN 157..225
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 229..297
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 302..370
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 371..437
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 442..510
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 514..583
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 588..656
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 660..729
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 734..803
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 807..876
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 880..979
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 980..1046
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 1058..1127
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT DOMAIN 1131..1200
FT /note="K Homology"
FT /evidence="ECO:0000259|SMART:SM00322"
FT REGION 14..73
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 918..948
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1242..1278
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 784..811
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1278 AA; 141918 MW; D61B018BA473F254 CRC64;
MSSVAVLTQE SFIEHRSGLL PEQSGVSSSP PAAGGPNAGE EEEELPTYKD AFPPLPEKAA
TPEGTQETSN AWTSKIRPLK SSIITQVFHV PLEERKYKDI NQFGEGEQAK VCVDIMHKTG
AHLELSLAKD QGLSIMVSGK LDAVMKARKE IVSRLQTQAS ATVAIPKEHH RFVIGKNGEK
LQELELKTAT KIQIPRPDDS SNQIKISGTK EGLEKAKHEI LLISAEQDKR AVERVNIDKV
YHPFITGAYN KIVGEMMQET GARINVPPPS VNKNEIVITG EKEQVALAVA LIKKIHEEKK
KSTTTIAVEV KKSQHKYVVG PKGNTLQEIL DRTGVSVEIP PSDNSSETVI LRGEPDRLGQ
ALTEVYAKAN SYTVSSVSAP SWLHRFIIGK KGQNLAKITQ QMPKVHIEFT EGEDKITLEG
PTKDVQIVQS QIEAIVTDLV SRMDYAEITV DPKFHRHLIG KGGVNINRIK ELHKVTVRIP
PDNEKSNLIR IEGDPQGVQE AKKELLELAS RMENERTKDL IIEHRLHRAI IGQKGEKIKE
VRDKFPEVII NFPDPAQKSD IVQLRGPRNE VEKCSKFMQK MVAEMVENSQ TLSVPIFKQF
HRNIIGKGGA NIKKIREETN TKIDLPAENS NSEMIVITGK KANCEAARNR ILAIQKELAN
ITEMDVSIPS KLHNSLIGSK GRLVRSIMEE CGGVHIHFPS EGSGIDKVTI RGPVEEVEKA
KQQLLALAEE KQIKSFTAEL HAKPEYHKFL IGKGGGNIRK VRDSTGARII FPTSEDKDQE
LITVVGTEEA VRTAQKELEE LIKSLDNIVE DTMSVDPKHH RYFVARRGQV LRDLADEYGG
VMVSFPRTAS QSDKITLKGA KECVEAAKKR MQEIVEDLEA QVTVDCVISQ KFHRSIMGPK
GSRIQQITRD HNVQIKFPER EDPQAAPPAE APVQENGEAN GEVKEPVDPN APKKCDVILI
SGRKERCEAA LEALKALVPV TIEVEVPFEL HRYIIGQKGS GIRKMMDEFE VNIQVPPPDQ
QSDKIAITGL ASHLDRAKEG LFERVKELQA EQAERALKSF KLTITVDPKY HPKIIGRKGA
IITTIRTEHD VNIQFPEKND ENQDQITITG YEQNAVAARE AIQAIVDELE EMITETITLD
SRVHARIIGA RGKGIRKIMD EFKIDLRFPQ SGAADPNLVT VVGRPEHVDE AIDHLLNLEE
EYLSDVVENE AKMAYMRPPG GSVAAADEQR GHSKGFVVRE APWATGNEKA PDMSSSEDFP
SFGAPVQAKA SPWGPKRF
//
