GenomeNet

Database: UniProt
Entry: M4A3D9_XIPMA
LinkDB: M4A3D9_XIPMA
Original site: M4A3D9_XIPMA 
ID   M4A3D9_XIPMA            Unreviewed;       686 AA.
AC   M4A3D9;
DT   01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT   05-DEC-2018, sequence version 2.
DT   27-MAR-2024, entry version 54.
DE   SubName: Full=Growth arrest specific 2 like 3 {ECO:0000313|Ensembl:ENSXMAP00000008983.2};
OS   Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC   Xiphophorus.
OX   NCBI_TaxID=8083 {ECO:0000313|Ensembl:ENSXMAP00000008983.2, ECO:0000313|Proteomes:UP000002852};
RN   [1] {ECO:0000313|Proteomes:UP000002852}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RA   Walter R., Schartl M., Warren W.;
RL   Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Proteomes:UP000002852}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RX   PubMed=23542700; DOI=10.1038/ng.2604;
RA   Schartl M., Walter R.B., Shen Y., Garcia T., Catchen J., Amores A.,
RA   Braasch I., Chalopin D., Volff J.N., Lesch K.P., Bisazza A., Minx P.,
RA   Hillier L., Wilson R.K., Fuerstenberg S., Boore J., Searle S.,
RA   Postlethwait J.H., Warren W.C.;
RT   "The genome of the platyfish, Xiphophorus maculatus, provides insights into
RT   evolutionary adaptation and several complex traits.";
RL   Nat. Genet. 45:567-572(2013).
RN   [3] {ECO:0000313|Ensembl:ENSXMAP00000008983.2}
RP   IDENTIFICATION.
RC   STRAIN=JP 163 A {ECO:0000313|Ensembl:ENSXMAP00000008983.2};
RG   Ensembl;
RL   Submitted (NOV-2023) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the GAS2 family.
CC       {ECO:0000256|ARBA:ARBA00038441}.
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DR   RefSeq; XP_014327611.1; XM_014472125.1.
DR   AlphaFoldDB; M4A3D9; -.
DR   STRING; 8083.ENSXMAP00000008983; -.
DR   Ensembl; ENSXMAT00000008997.2; ENSXMAP00000008983.2; ENSXMAG00000008963.2.
DR   GeneID; 102230404; -.
DR   KEGG; xma:102230404; -.
DR   CTD; 283431; -.
DR   eggNOG; KOG0516; Eukaryota.
DR   GeneTree; ENSGT00940000159389; -.
DR   HOGENOM; CLU_025484_1_1_1; -.
DR   InParanoid; M4A3D9; -.
DR   OMA; YCTCPDQ; -.
DR   OrthoDB; 1361287at2759; -.
DR   Proteomes; UP000002852; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR   GO; GO:0031941; C:filamentous actin; IEA:Ensembl.
DR   GO; GO:0005874; C:microtubule; IEA:Ensembl.
DR   GO; GO:0008017; F:microtubule binding; IEA:InterPro.
DR   GO; GO:0021923; P:cell proliferation in hindbrain ventricular zone; IEA:Ensembl.
DR   GO; GO:0021591; P:ventricular system development; IEA:Ensembl.
DR   Gene3D; 1.10.418.10; Calponin-like domain; 1.
DR   Gene3D; 3.30.920.20; Gas2-like domain; 1.
DR   InterPro; IPR001715; CH_dom.
DR   InterPro; IPR036872; CH_dom_sf.
DR   InterPro; IPR003108; GAR_dom.
DR   InterPro; IPR036534; GAR_dom_sf.
DR   PANTHER; PTHR46756:SF7; GAS2-LIKE PROTEIN 3; 1.
DR   PANTHER; PTHR46756; TRANSGELIN; 1.
DR   Pfam; PF00307; CH; 1.
DR   Pfam; PF02187; GAS2; 1.
DR   SMART; SM00033; CH; 1.
DR   SMART; SM00243; GAS2; 1.
DR   SUPFAM; SSF47576; Calponin-homology domain, CH-domain; 1.
DR   SUPFAM; SSF143575; GAS2 domain-like; 1.
DR   PROSITE; PS50021; CH; 1.
DR   PROSITE; PS51460; GAR; 1.
PE   3: Inferred from homology;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Cytoskeleton {ECO:0000256|ARBA:ARBA00023212};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002852}.
FT   DOMAIN          56..177
FT                   /note="Calponin-homology (CH)"
FT                   /evidence="ECO:0000259|PROSITE:PS50021"
FT   DOMAIN          218..290
FT                   /note="GAR"
FT                   /evidence="ECO:0000259|PROSITE:PS51460"
FT   REGION          305..331
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          376..576
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          600..686
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        401..424
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        454..473
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        474..488
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        538..576
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        604..622
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        639..660
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        665..686
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   686 AA;  73769 MW;  FE9DDF8582C25307 CRC64;
     MAVQTGIQVW FSEKFDAPLL SPRCPRSPLA QRHGPGLSNV FQYDQWLAVR HEATLVPMQE
     DLAIWLSGML GEEVRAELFM EELDNGVKLC QLIGALQTKV AQTCPSALPK LFPTRKVACK
     RDASPGSFFA RDNTANFLAW CRHVGVDNTY LFESEGLVLH KEPRQVCLCL LEVGRIVSRY
     GVEPPVLVKL EKEIELEETL LMTEEPPAAV KTFSVCCQHG ALYQPEELSM DDPPCNCSNK
     VSIEYLSEGR YRLGDKTIFI RMLHGKHVMV RVGGGWDTLR GFLTKYDPLR VLQFTTLEQK
     ILAFQKGPPG LGGHRANNAP PPPPHMDPLA AVNGLISSSA SSSSSCSSSA SAPPVGQSCR
     SYVPSPACTP ILARKGSAAV PKKDLQTVPS SPRKPTQLPL PVPTKGSSSL PSSPVSSSCR
     WSPSPGSHRR ALTPSAPPVE PSSASKLKPR PHGPSAHPRS PVCPEPSSKC PKPSSPCTSP
     TTEHMPRSTT VPAPRDIKPP SGASQRSHLA QRRSGSPASR LRLGTIRKAR VATRTVPVQK
     TVPRQFPSPC SQAGSSRAPT PCSQAGSSRA PTPCSQAVSP ATVISICSMS KVKIKVASAI
     PGPVPSIPSS SSKGNQKAPP TAQRTVRKPA APGNPSTKTA LKPEATITQP TTSQRNPVKA
     AEKIPQSKTR SDKPYFEMTT RRKQRA
//
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