GenomeNet

Database: UniProt
Entry: M4A7I4_XIPMA
LinkDB: M4A7I4_XIPMA
Original site: M4A7I4_XIPMA 
ID   M4A7I4_XIPMA            Unreviewed;       515 AA.
AC   M4A7I4;
DT   01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT   01-MAY-2013, sequence version 1.
DT   08-NOV-2023, entry version 53.
DE   SubName: Full=SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 {ECO:0000313|Ensembl:ENSXMAP00000010428.1};
OS   Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC   Xiphophorus.
OX   NCBI_TaxID=8083 {ECO:0000313|Ensembl:ENSXMAP00000010428.1, ECO:0000313|Proteomes:UP000002852};
RN   [1] {ECO:0000313|Proteomes:UP000002852}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RA   Walter R., Schartl M., Warren W.;
RL   Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Proteomes:UP000002852}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RX   PubMed=23542700; DOI=10.1038/ng.2604;
RA   Schartl M., Walter R.B., Shen Y., Garcia T., Catchen J., Amores A.,
RA   Braasch I., Chalopin D., Volff J.N., Lesch K.P., Bisazza A., Minx P.,
RA   Hillier L., Wilson R.K., Fuerstenberg S., Boore J., Searle S.,
RA   Postlethwait J.H., Warren W.C.;
RT   "The genome of the platyfish, Xiphophorus maculatus, provides insights into
RT   evolutionary adaptation and several complex traits.";
RL   Nat. Genet. 45:567-572(2013).
RN   [3] {ECO:0000313|Ensembl:ENSXMAP00000010428.1}
RP   IDENTIFICATION.
RC   STRAIN=JP 163 A {ECO:0000313|Ensembl:ENSXMAP00000010428.1};
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the SMARCD family.
CC       {ECO:0000256|ARBA:ARBA00010619}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   RefSeq; XP_005807609.1; XM_005807552.2.
DR   AlphaFoldDB; M4A7I4; -.
DR   STRING; 8083.ENSXMAP00000010428; -.
DR   Ensembl; ENSXMAT00000010442.2; ENSXMAP00000010428.1; ENSXMAG00000010389.2.
DR   GeneID; 102228838; -.
DR   KEGG; xma:102228838; -.
DR   CTD; 6602; -.
DR   eggNOG; KOG2570; Eukaryota.
DR   GeneTree; ENSGT00940000156629; -.
DR   HOGENOM; CLU_023529_0_1_1; -.
DR   InParanoid; M4A7I4; -.
DR   OMA; PSMEASY; -.
DR   OrthoDB; 9355at2759; -.
DR   Proteomes; UP000002852; Unassembled WGS sequence.
DR   GO; GO:0016514; C:SWI/SNF complex; IEA:UniProt.
DR   GO; GO:0060216; P:definitive hemopoiesis; IEA:Ensembl.
DR   GO; GO:0002244; P:hematopoietic progenitor cell differentiation; IEA:Ensembl.
DR   GO; GO:0061053; P:somite development; IEA:Ensembl.
DR   GO; GO:0021510; P:spinal cord development; IEA:Ensembl.
DR   CDD; cd17674; SWIB_BAF60A; 1.
DR   Gene3D; 1.10.245.10; SWIB/MDM2 domain; 1.
DR   InterPro; IPR038041; SMARCD1_SWIB_dom.
DR   InterPro; IPR019835; SWIB_domain.
DR   InterPro; IPR036885; SWIB_MDM2_dom_sf.
DR   InterPro; IPR003121; SWIB_MDM2_domain.
DR   PANTHER; PTHR13844; SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D; 1.
DR   PANTHER; PTHR13844:SF1; SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D MEMBER 1; 1.
DR   Pfam; PF02201; SWIB; 1.
DR   SMART; SM00151; SWIB; 1.
DR   SUPFAM; SSF47592; SWIB/MDM2 domain; 1.
DR   PROSITE; PS51925; SWIB_MDM2; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000002852}.
FT   DOMAIN          290..367
FT                   /note="DM2"
FT                   /evidence="ECO:0000259|PROSITE:PS51925"
FT   REGION          1..131
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        57..75
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        105..119
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   515 AA;  58523 MW;  E6C9A1E2E890CA52 CRC64;
     MAARGGFQST PTAGGGGAMG PGPPVPGAAP GMGPGTPSGR MGPTSGAQNH MYRSPMPGPG
     YPRPGMPPSS RMTPQGPAMG PPGYGSSPVS RPGMPGVMDP SRKRPAPQQI QQVQQQQNRN
     QHTKKKKMAD KILPQRIREL VPESQAYMDL LAFERKLDQT IMRKRLDIQE ALKRPIKQKR
     KLRIFISNTF NPAKPDAEDG EGTVASWELR VEGRLLEDTA VSKYEATKQK RKFSSFFKSL
     VIELDKDLYG PDNHLVEWHR TATTQETDGF QVKRPGDVGV RCTVLLMLDY QPPQFKLDPR
     LARMLGIHTQ TRPVIIQALW QYVKTHKLQD PHEREFINCD KYLQQIFETQ RMKFSEIPQR
     LHALLMPPEP IIINHVISVD PNDQKKTACY DIDVEVDDTL KTQMNSFLLS TASQQEIAGL
     DNKIHETIET INQLKTQREF MLSFARDPQG FINDWLQSQC RDFKTITDVV GNPEEERRAE
     FYYQPWAQEA VCRYFYSKVQ QRRQELEQAL GIRNT
//
DBGET integrated database retrieval system