GenomeNet

Database: UniProt
Entry: M4C8U0_BRARP
LinkDB: M4C8U0_BRARP
Original site: M4C8U0_BRARP 
ID   M4C8U0_BRARP            Unreviewed;       996 AA.
AC   M4C8U0;
DT   01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT   01-MAY-2013, sequence version 1.
DT   18-SEP-2019, entry version 30.
DE   RecName: Full=LRRNT_2 domain-containing protein {ECO:0000259|Pfam:PF08263};
OS   Brassica rapa subsp. pekinensis (Chinese cabbage) (Brassica
OS   pekinensis).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae;
OC   Brassica.
OX   NCBI_TaxID=51351 {ECO:0000313|EnsemblPlants:Bra000618.1-P, ECO:0000313|Proteomes:UP000011750};
RN   [1] {ECO:0000313|EnsemblPlants:Bra000618.1-P, ECO:0000313|Proteomes:UP000011750}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Chiifu-401-42 {ECO:0000313|EnsemblPlants:Bra000618.1-P,
RC   ECO:0000313|Proteomes:UP000011750};
RX   PubMed=21873998; DOI=10.1038/ng.919;
RG   Brassica rapa Genome Sequencing Project Consortium;
RA   Wang X., Wang H., Wang J., Sun R., Wu J., Liu S., Bai Y., Mun J.H.,
RA   Bancroft I., Cheng F., Huang S., Li X., Hua W., Wang J., Wang X.,
RA   Freeling M., Pires J.C., Paterson A.H., Chalhoub B., Wang B.,
RA   Hayward A., Sharpe A.G., Park B.S., Weisshaar B., Liu B., Li B.,
RA   Liu B., Tong C., Song C., Duran C., Peng C., Geng C., Koh C., Lin C.,
RA   Edwards D., Mu D., Shen D., Soumpourou E., Li F., Fraser F.,
RA   Conant G., Lassalle G., King G.J., Bonnema G., Tang H., Wang H.,
RA   Belcram H., Zhou H., Hirakawa H., Abe H., Guo H., Wang H., Jin H.,
RA   Parkin I.A., Batley J., Kim J.S., Just J., Li J., Xu J., Deng J.,
RA   Kim J.A., Li J., Yu J., Meng J., Wang J., Min J., Poulain J., Wang J.,
RA   Hatakeyama K., Wu K., Wang L., Fang L., Trick M., Links M.G., Zhao M.,
RA   Jin M., Ramchiary N., Drou N., Berkman P.J., Cai Q., Huang Q., Li R.,
RA   Tabata S., Cheng S., Zhang S., Zhang S., Huang S., Sato S., Sun S.,
RA   Kwon S.J., Choi S.R., Lee T.H., Fan W., Zhao X., Tan X., Xu X.,
RA   Wang Y., Qiu Y., Yin Y., Li Y., Du Y., Liao Y., Lim Y., Narusaka Y.,
RA   Wang Y., Wang Z., Li Z., Wang Z., Xiong Z., Zhang Z.;
RT   "The genome of the mesopolyploid crop species Brassica rapa.";
RL   Nat. Genet. 43:1035-1039(2011).
RN   [2] {ECO:0000313|EnsemblPlants:Bra000618.1-P}
RP   IDENTIFICATION.
RC   STRAIN=cv. Chiifu-401-42 {ECO:0000313|EnsemblPlants:Bra000618.1-P};
RG   EnsemblPlants;
RL   Submitted (JUL-2019) to UniProtKB.
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DR   STRING; 3711.Bra000618.1-P; -.
DR   EnsemblPlants; Bra000618.1; Bra000618.1-P; Bra000618.
DR   Gramene; Bra000618.1; Bra000618.1-P; Bra000618.
DR   InParanoid; M4C8U0; -.
DR   OMA; YLYGQVP; -.
DR   Proteomes; UP000011750; Chromosome A03.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   Gene3D; 3.80.10.10; -; 4.
DR   InterPro; IPR001611; Leu-rich_rpt.
DR   InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR   InterPro; IPR032675; LRR_dom_sf.
DR   InterPro; IPR013210; LRR_N_plant-typ.
DR   Pfam; PF00560; LRR_1; 2.
DR   Pfam; PF13516; LRR_6; 1.
DR   Pfam; PF13855; LRR_8; 2.
DR   Pfam; PF08263; LRRNT_2; 1.
DR   SMART; SM00369; LRR_TYP; 10.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000011750};
KW   Leucine-rich repeat {ECO:0000256|SAAS:SAAS01218143};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000011750};
KW   Repeat {ECO:0000256|SAAS:SAAS01218113};
KW   Signal {ECO:0000256|SAM:SignalP};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   SIGNAL        1     18       {ECO:0000256|SAM:SignalP}.
FT   CHAIN        19    996       LRRNT_2 domain-containing protein.
FT                                {ECO:0000256|SAM:SignalP}.
FT                                /FTId=PRO_5004049345.
FT   TRANSMEM    954    974       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN       29     83       LRRNT_2. {ECO:0000259|Pfam:PF08263}.
SQ   SEQUENCE   996 AA;  110309 MW;  622E2EF07CB4E93C CRC64;
     MTLSFLFLFI FKFQDVTAFA TTARHLCRPE QRNVLLEFKK VFEIRRSSSK LCNINGRIVG
     SYPKTESWGN NSDCCYWGGV TCDAKSKDVI KLDLSCSCLH GRFHSNTSLV RLQNLPSLKT
     LDLSNNYLYG QVPSSIGKLS RLTSLSLSNN RFSGEILPSL ENITRLAFLS LSNNLFSGQI
     PLWIGNFSHL TFLDLSSNHF AGQIPFSVGL LSQLTSLSLS DNQFSGQIPS SLGNLSHLTS
     LDFSSNHFSG QIPPSLGKLS HLTYLQLFDN QFSDQIPSSV GNLSHLTSLH FSHNQFSGQI
     PSSVGKLSRL TSLDCCENSL VGQIPSSFSL LNQLTNLVVN SNKLSGNFPI ALLNLTKLSY
     VSLSNNRFTG TLPPNITSLS NLEFISAYDN SFGGPLPSSL FNLPALTSIY LTNNQLEGSL
     KFGNISSPSK LRVLSLGSNK FKGPITSSIS KLANLEVLDI SHWNAHVDFS IFSLLRSLQR
     LYLSHLRATP RIDLSTILSC FKSLDLLDLS GNHVLATNET TVSDLLPLVM ISNLNLSGCG
     ITEFPELLRT QTLLQTLDIS NNEIKGQVPG WLWMLPNLGY LDLSNNTFIG FERSTNRKLS
     SVLGHLFGSN NNFSGEVPSL ICELHSLRTL DLSNNNLSGP IPLCMGNLKS TLSVLNVRQN
     RLSGCLLGNA FESLRSFDVG HNQLVGKLPR SLVHFSALEV LNVESNMIND TFPFWLNSLQ
     ALKVLVLRSN AFHGPVHQAA FLKLQIIDIS HNHFSGMLPS DYFVNWRKMS SRETNEDGSN
     LNYIGEGYYH DSMVLMNKGI KMELVRILEI YTALDFSGNR LEGEIPKSIG LLKELHVLNL
     SNNAFTGHIP SSMENLTALE SLDVSQNNIS GEIPQELGNL SYLAYMNFSH NQLVGLVPGG
     TQFRRQACSS FKDNSGLFGP ALDEDCRDIH RPSSPPYERL EVEEEEEEED VFCWIAAAIG
     FVFGLAIGCI LVCYKTEWFT TPFGRNKHRS RSTPTR
//
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