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Database: UniProt
Entry: M4DAV3_BRARP
LinkDB: M4DAV3_BRARP
Original site: M4DAV3_BRARP 
ID   M4DAV3_BRARP            Unreviewed;       504 AA.
AC   M4DAV3;
DT   01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT   01-MAY-2013, sequence version 1.
DT   05-JUN-2019, entry version 38.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EnsemblPlants:Bra013613.1-P};
OS   Brassica rapa subsp. pekinensis (Chinese cabbage) (Brassica
OS   pekinensis).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae;
OC   Brassica.
OX   NCBI_TaxID=51351 {ECO:0000313|EnsemblPlants:Bra013613.1-P, ECO:0000313|Proteomes:UP000011750};
RN   [1] {ECO:0000313|EnsemblPlants:Bra013613.1-P, ECO:0000313|Proteomes:UP000011750}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Chiifu-401-42 {ECO:0000313|EnsemblPlants:Bra013613.1-P,
RC   ECO:0000313|Proteomes:UP000011750};
RX   PubMed=21873998; DOI=10.1038/ng.919;
RG   Brassica rapa Genome Sequencing Project Consortium;
RA   Wang X., Wang H., Wang J., Sun R., Wu J., Liu S., Bai Y., Mun J.H.,
RA   Bancroft I., Cheng F., Huang S., Li X., Hua W., Wang J., Wang X.,
RA   Freeling M., Pires J.C., Paterson A.H., Chalhoub B., Wang B.,
RA   Hayward A., Sharpe A.G., Park B.S., Weisshaar B., Liu B., Li B.,
RA   Liu B., Tong C., Song C., Duran C., Peng C., Geng C., Koh C., Lin C.,
RA   Edwards D., Mu D., Shen D., Soumpourou E., Li F., Fraser F.,
RA   Conant G., Lassalle G., King G.J., Bonnema G., Tang H., Wang H.,
RA   Belcram H., Zhou H., Hirakawa H., Abe H., Guo H., Wang H., Jin H.,
RA   Parkin I.A., Batley J., Kim J.S., Just J., Li J., Xu J., Deng J.,
RA   Kim J.A., Li J., Yu J., Meng J., Wang J., Min J., Poulain J., Wang J.,
RA   Hatakeyama K., Wu K., Wang L., Fang L., Trick M., Links M.G., Zhao M.,
RA   Jin M., Ramchiary N., Drou N., Berkman P.J., Cai Q., Huang Q., Li R.,
RA   Tabata S., Cheng S., Zhang S., Zhang S., Huang S., Sato S., Sun S.,
RA   Kwon S.J., Choi S.R., Lee T.H., Fan W., Zhao X., Tan X., Xu X.,
RA   Wang Y., Qiu Y., Yin Y., Li Y., Du Y., Liao Y., Lim Y., Narusaka Y.,
RA   Wang Y., Wang Z., Li Z., Wang Z., Xiong Z., Zhang Z.;
RT   "The genome of the mesopolyploid crop species Brassica rapa.";
RL   Nat. Genet. 43:1035-1039(2011).
RN   [2] {ECO:0000313|EnsemblPlants:Bra013613.1-P}
RP   IDENTIFICATION.
RC   STRAIN=cv. Chiifu-401-42 {ECO:0000313|EnsemblPlants:Bra013613.1-P};
RG   EnsemblPlants;
RL   Submitted (OCT-2018) to UniProtKB.
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DR   STRING; 3711.Bra013613.1-P; -.
DR   EnsemblPlants; Bra013613.1; Bra013613.1-P; Bra013613.
DR   Gramene; Bra013613.1; Bra013613.1-P; Bra013613.
DR   InParanoid; M4DAV3; -.
DR   OMA; LNVYCCL; -.
DR   Proteomes; UP000011750; Chromosome A01.
DR   GO; GO:0036459; F:thiol-dependent ubiquitinyl hydrolase activity; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0016579; P:protein deubiquitination; IEA:InterPro.
DR   GO; GO:0000245; P:spliceosomal complex assembly; IEA:InterPro.
DR   CDD; cd02669; Peptidase_C19M; 1.
DR   Gene3D; 3.30.40.10; -; 1.
DR   InterPro; IPR038765; Papain-like_cys_pep_sf.
DR   InterPro; IPR001394; Peptidase_C19_UCH.
DR   InterPro; IPR033809; USP39.
DR   InterPro; IPR028889; USP_dom.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   InterPro; IPR001607; Znf_UBP.
DR   PANTHER; PTHR21646:SF16; PTHR21646:SF16; 1.
DR   Pfam; PF00443; UCH; 1.
DR   Pfam; PF02148; zf-UBP; 1.
DR   SMART; SM00290; ZnF_UBP; 1.
DR   SUPFAM; SSF54001; SSF54001; 1.
DR   PROSITE; PS50235; USP_3; 1.
DR   PROSITE; PS50271; ZF_UBP; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000011750};
KW   Metal-binding {ECO:0000256|SAAS:SAAS01044152};
KW   Reference proteome {ECO:0000313|Proteomes:UP000011750};
KW   Zinc {ECO:0000256|SAAS:SAAS01044373};
KW   Zinc-finger {ECO:0000256|SAAS:SAAS01044352}.
FT   DOMAIN       91    152       UBP-type. {ECO:0000259|PROSITE:PS50271}.
FT   DOMAIN      194    502       USP. {ECO:0000259|PROSITE:PS50235}.
FT   ZN_FING      91    152       UBP-type. {ECO:0000256|PROSITE-ProRule:
FT                                PRU00502}.
FT   REGION        1     65       Disordered. {ECO:0000256|MobiDB-lite:
FT                                M4DAV3}.
FT   COMPBIAS      1     47       Polyampholyte. {ECO:0000256|MobiDB-lite:
FT                                M4DAV3}.
SQ   SEQUENCE   504 AA;  58950 MW;  E991892C3C5FE27E CRC64;
     MKSEREVKNG GVEEERDAKR KRVIERSNDH DVEEAENEQK KDNGVAELDD NEDDDADASK
     GGKRSRRVEV RRDCPYLDTV NRQVLDFDFE RFCSVSLSNL NVYACLVCGK YFQGRSQKSH
     AYTHSLEAGH HVYINLLTEK VYCLPDSYEI NDPSLDDIRH VLNPRFSRAQ VEELDRNKQW
     SRALDGSDYL PGMVGLNNIQ KTEFVNVTIQ SLMRVTPLRN FFLIPENYQH CKSTLVHRFG
     ELTRKIWHAR NFKGQVSPHE FLQAVMKASK KRFRIGQQSD PVEFMSWLLN TLHMDLRTSK
     DASSIIHQCF QGELEVVREY QGNENKEISR MPFLMLGLDL PPPPLFKDVM EKNIIPQVAL
     FDLLKKFDGE TVTEVVRPRL ARMRYRVTKS PPYLMFHMVR FKKNNFFKEK NPTLVNFPVK
     DMELRDYIPS LPTAAEGEKT CTKYNLIANI VHDGKPEDGY FRVFVQRKSQ ELWYEMQDLH
     VAETLPQMVE LSEAYMQIYE LQEE
//
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