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Database: UniProt
Entry: M4E797_BRARP
LinkDB: M4E797_BRARP
Original site: M4E797_BRARP 
ID   M4E797_BRARP            Unreviewed;      1376 AA.
AC   M4E797;
DT   01-MAY-2013, integrated into UniProtKB/TrEMBL.
DT   01-MAY-2013, sequence version 1.
DT   11-DEC-2019, entry version 46.
DE   RecName: Full=TIR domain-containing protein {ECO:0000259|PROSITE:PS50104};
OS   Brassica rapa subsp. pekinensis (Chinese cabbage) (Brassica pekinensis).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=51351 {ECO:0000313|EnsemblPlants:Bra024652.1-P, ECO:0000313|Proteomes:UP000011750};
RN   [1] {ECO:0000313|EnsemblPlants:Bra024652.1-P, ECO:0000313|Proteomes:UP000011750}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Chiifu-401-42 {ECO:0000313|EnsemblPlants:Bra024652.1-P,
RC   ECO:0000313|Proteomes:UP000011750};
RX   PubMed=21873998; DOI=10.1038/ng.919;
RG   Brassica rapa Genome Sequencing Project Consortium;
RA   Wang X., Wang H., Wang J., Sun R., Wu J., Liu S., Bai Y., Mun J.H.,
RA   Bancroft I., Cheng F., Huang S., Li X., Hua W., Wang J., Wang X.,
RA   Freeling M., Pires J.C., Paterson A.H., Chalhoub B., Wang B., Hayward A.,
RA   Sharpe A.G., Park B.S., Weisshaar B., Liu B., Li B., Liu B., Tong C.,
RA   Song C., Duran C., Peng C., Geng C., Koh C., Lin C., Edwards D., Mu D.,
RA   Shen D., Soumpourou E., Li F., Fraser F., Conant G., Lassalle G.,
RA   King G.J., Bonnema G., Tang H., Wang H., Belcram H., Zhou H., Hirakawa H.,
RA   Abe H., Guo H., Wang H., Jin H., Parkin I.A., Batley J., Kim J.S., Just J.,
RA   Li J., Xu J., Deng J., Kim J.A., Li J., Yu J., Meng J., Wang J., Min J.,
RA   Poulain J., Wang J., Hatakeyama K., Wu K., Wang L., Fang L., Trick M.,
RA   Links M.G., Zhao M., Jin M., Ramchiary N., Drou N., Berkman P.J., Cai Q.,
RA   Huang Q., Li R., Tabata S., Cheng S., Zhang S., Zhang S., Huang S.,
RA   Sato S., Sun S., Kwon S.J., Choi S.R., Lee T.H., Fan W., Zhao X., Tan X.,
RA   Xu X., Wang Y., Qiu Y., Yin Y., Li Y., Du Y., Liao Y., Lim Y., Narusaka Y.,
RA   Wang Y., Wang Z., Li Z., Wang Z., Xiong Z., Zhang Z.;
RT   "The genome of the mesopolyploid crop species Brassica rapa.";
RL   Nat. Genet. 43:1035-1039(2011).
RN   [2] {ECO:0000313|EnsemblPlants:Bra024652.1-P}
RP   IDENTIFICATION.
RC   STRAIN=cv. Chiifu-401-42 {ECO:0000313|EnsemblPlants:Bra024652.1-P};
RG   EnsemblPlants;
RL   Submitted (OCT-2019) to UniProtKB.
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DR   STRING; 3711.Bra024652.1-P; -.
DR   EnsemblPlants; Bra024652.1; Bra024652.1-P; Bra024652.
DR   Gramene; Bra024652.1; Bra024652.1-P; Bra024652.
DR   InParanoid; M4E797; -.
DR   OMA; EINAANC; -.
DR   Proteomes; UP000011750; Chromosome A09.
DR   GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR   GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR   Gene3D; 3.40.50.10140; -; 1.
DR   Gene3D; 3.80.10.10; -; 2.
DR   InterPro; IPR001611; Leu-rich_rpt.
DR   InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR   InterPro; IPR032675; LRR_dom_sf.
DR   InterPro; IPR002182; NB-ARC.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR000157; TIR_dom.
DR   InterPro; IPR035897; Toll_tir_struct_dom_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   Pfam; PF13855; LRR_8; 1.
DR   Pfam; PF00931; NB-ARC; 1.
DR   Pfam; PF01582; TIR; 1.
DR   SMART; SM00369; LRR_TYP; 7.
DR   SMART; SM00255; TIR; 1.
DR   SUPFAM; SSF46785; SSF46785; 1.
DR   SUPFAM; SSF52200; SSF52200; 1.
DR   SUPFAM; SSF52540; SSF52540; 1.
DR   PROSITE; PS50104; TIR; 1.
PE   4: Predicted;
KW   Leucine-rich repeat {ECO:0000256|SAAS:SAAS00889600};
KW   Reference proteome {ECO:0000313|Proteomes:UP000011750};
KW   Repeat {ECO:0000256|SAAS:SAAS00938886}.
FT   DOMAIN          12..152
FT                   /note="TIR"
FT                   /evidence="ECO:0000259|PROSITE:PS50104"
SQ   SEQUENCE   1376 AA;  155270 MW;  756BAD2555719EBA CRC64;
     METEVITKPH RLKFDVFLSF RGEDTRHTIT ERVYDALHRK EKVRVFRDDE GMQRGDEINP
     SLVAAMEDSA ASVVVLSPRY ADSHWCLDEL ATLCDLRASL RRPMIPIFYE VDPSHVRKQN
     DHFAKDFEVH AKRFKEEKIQ RWRKAMTLVG NLSGFVCKED SVDDEMIGLL VKRVLSEVSN
     TPENVGDYTV GLESRVDDLI NLVDVKSTSD VQILGLHGMG GIGKTTLAKA CYNKIVADFE
     HRVFISNVRE RSSDHDGLVN LQKSLIKGLL RSLPEIEDVN RGRDKIRESV YEKKILVVLD
     DVDKVDQVDA LVGEKSWYSE GSLIVITTRD EDILSKVLVK QKYEVRCLNE EQALKLFSYH
     SLRKEKPTES LLELSKKIVK ISGLLPLALE VFGSLLYDKK EAKEWQTQLE KLKNTQPGNL
     QDVLKLSFDS LDDEEKNVFL DIACLFLKMQ IKKEEIVDVL NGCGFNAEAA LSVLRQKSLV
     KFLSDENLWM HDQIRDMGRQ LDLKETPGDT RMRSRLWDRA EIMTVLNNMK GTSSIQGIVL
     DFKKKLATDP SADNIALGNL HDNPGIRAVF SYLKNKFVGF PAEEKPKSSE NTIPVEPFVP
     MTKLRLLQIN HVELAGNLER LPSELKWIQW RGCPLKEVPL NLLARQLAVL DLAESAIRRI
     QSLHIEGVDG NLKVVNLRGC HSLEAVPDLS NHKFLEKLVF ERCMRLVEVP SSVGNLRTLL
     HLDLRNCPNL TEFLVDVSGL KSLEKLYLSG CSSLSVLPEN IGLMPCLKEL FLDATGIKEL
     PDSIFRLENL QKLSLKSCRS IQELPMCIGT LTSLEELDLS STSLQSLPSS IGDLKNLQKL
     SLMHCASLSK IPDTIKELKS LKKLFIYGSA VEELPLCLGS LPCLTDFSAG ECKLLKHVPS
     SIGGLNSLLE LELDWTPIET LPAEIGDLHF IQKLGLRNCK SLKALPESIG NMDTLHSLFL
     TGANIEKLPE TFGKLENLDT LRMDNCKMIK RLPESFGDLK SLHDLYMKET SVVELPESFG
     NLSNLRVLKI LKKPLFRSSP GTSEEPSFVE VPNSFSNLLS LEEIDAKGWG IWGKVPDDLG
     KLSSLKKLEL GNNYFHSLPS SLEGLWNLKL FTLYDCQELK CLPPLPWKLE KLNLANCFAL
     ESIADLSKLE ILEELNLTNC GKVDDVPGLE HLKALKRLYM SGCNSRLSVA VKKRLSKASL
     KMMRNLSLPG NRIPDWFSQG PLTFSPQPNR ELRGVILAVV VALNQDCIDD YQLPDVMEVQ
     AQILELDSPL YTHTLHLFGV PRTSDDQLHI CRYPTLHPMV WTFRDGYTIQ VVKREPPIKQ
     GVELKMHGIH LVYEGDDDFK GEEHVLNETQ LTVSQKLANF FRSFEEGEAS SESESA
//
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