ID   M4S5A9_9SPHN            Unreviewed;       336 AA.
AC   M4S5A9;
DT   29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT   29-MAY-2013, sequence version 1.
DT   24-JAN-2024, entry version 34.
DE   SubName: Full=Cytochrome d ubiquinol oxidase subunit II {ECO:0000313|EMBL:AGH50936.1};
GN   ORFNames=G432_16090 {ECO:0000313|EMBL:AGH50936.1};
OS   Sphingomonas sp. MM-1.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingomonas.
OX   NCBI_TaxID=745310 {ECO:0000313|EMBL:AGH50936.1, ECO:0000313|Proteomes:UP000011816};
RN   [1] {ECO:0000313|EMBL:AGH50936.1, ECO:0000313|Proteomes:UP000011816}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MM-1 {ECO:0000313|EMBL:AGH50936.1};
RX   PubMed=23682148;
RA   Tabata M., Ohtsubo Y., Ohhata S., Tsuda M., Nagata Y.;
RT   "Complete Genome Sequence of the gamma-Hexachlorocyclohexane-Degrading
RT   Bacterium Sphingomonas sp. Strain MM-1.";
RL   Genome Announc. 1:E00247-13(2013).
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- SIMILARITY: Belongs to the cytochrome ubiquinol oxidase subunit 2
CC       family. {ECO:0000256|ARBA:ARBA00007543}.
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DR   EMBL; CP004036; AGH50936.1; -; Genomic_DNA.
DR   AlphaFoldDB; M4S5A9; -.
DR   STRING; 745310.G432_16090; -.
DR   KEGG; sphm:G432_16090; -.
DR   PATRIC; fig|745310.14.peg.3353; -.
DR   eggNOG; COG1294; Bacteria.
DR   HOGENOM; CLU_049294_1_0_5; -.
DR   Proteomes; UP000011816; Chromosome.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR   InterPro; IPR003317; Cyt-d_oxidase_su2.
DR   NCBIfam; TIGR00203; cydB; 1.
DR   PANTHER; PTHR43141; CYTOCHROME BD2 SUBUNIT II; 1.
DR   PANTHER; PTHR43141:SF4; CYTOCHROME BD2 SUBUNIT II; 1.
DR   Pfam; PF02322; Cyt_bd_oxida_II; 1.
PE   3: Inferred from homology;
KW   Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000011816};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        6..32
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        80..99
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        111..135
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        155..178
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        190..209
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        221..245
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        257..278
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        298..321
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
SQ   SEQUENCE   336 AA;  37003 MW;  6A7924070B3EA854 CRC64;
     MDLTVIWAAI IAIAVAAYVL MDGFDLGIGI LFPKFRVGRE RDTAMNAIAP VWDGNETWLV
     MGGGGLLAAF PLAYSIVLPA LYAPLIAMLL ALVFRGVAFE FRWRDPNHRR FWDFAFFAGS
     LVATFAQGIT LGALLQGIEV HDRAYSGGWW DWLSGFSLLT GVSLVIGYAL LGAGWLIWKT
     EGPLQADARR FARPLVPALV VAIAAVSLST PFLEMQYWQR WFVWPGLIVA VPMPLLIAFV
     AFMLWRSIGR APDSHPFLWT LGLFALSMAG LAISIWPWVI PGRVSIWDAA APHSSQVFML
     IGAGVLIPVI LAYTAWAYWV FRGKVGDDGY HAHGDH
//