ID M5C0P8_THACB Unreviewed; 813 AA.
AC M5C0P8;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE SubName: Full=Retrotransposable element Tf2 155 kDa protein type 1 {ECO:0000313|EMBL:CCO32969.1};
GN ORFNames=BN14_07036 {ECO:0000313|EMBL:CCO32969.1};
OS Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) (Lettuce bottom
OS rot fungus) (Rhizoctonia solani).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Cantharellales; Ceratobasidiaceae; Rhizoctonia; Rhizoctonia solani AG-1.
OX NCBI_TaxID=1108050 {ECO:0000313|EMBL:CCO32969.1, ECO:0000313|Proteomes:UP000012065};
RN [1] {ECO:0000313|EMBL:CCO32969.1, ECO:0000313|Proteomes:UP000012065}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AG1-IB / isolate 7/3/14 {ECO:0000313|Proteomes:UP000012065};
RX PubMed=23280342; DOI=10.1016/j.jbiotec.2012.12.010;
RA Wibberg D.W., Jelonek L.J., Rupp O.R., Hennig M.H., Eikmeyer F.E.,
RA Goesmann A.G., Hartmann A.H., Borriss R.B., Grosch R.G., Puehler A.P.,
RA Schlueter A.S.;
RT "Establishment and interpretation of the genome sequence of the
RT phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14.";
RL J. Biotechnol. 0:0-0(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCO32969.1}.
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DR EMBL; CAOJ01010751; CCO32969.1; -; Genomic_DNA.
DR AlphaFoldDB; M5C0P8; -.
DR HOGENOM; CLU_000384_38_0_1; -.
DR Proteomes; UP000012065; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd09274; RNase_HI_RT_Ty3; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 2.40.50.40; -; 1.
DR Gene3D; 3.10.20.370; -; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR017984; Chromo_dom_subgr.
DR InterPro; IPR023780; Chromo_domain.
DR InterPro; IPR023779; Chromodomain_CS.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041577; RT_RNaseH_2.
DR PANTHER; PTHR37984:SF7; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR Pfam; PF00385; Chromo; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF17919; RT_RNaseH_2; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF00078; RVT_1; 1.
DR PRINTS; PR00504; CHROMODOMAIN.
DR SMART; SM00298; CHROMO; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS00598; CHROMO_1; 1.
DR PROSITE; PS50013; CHROMO_2; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464}.
FT DOMAIN 1..82
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT DOMAIN 454..613
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT DOMAIN 751..800
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
SQ SEQUENCE 813 AA; 93582 MW; 6FA23CB1B926BDA7 CRC64;
MPFGLSGAPG AFQAMMNETF QDLLDVSVII YLDDILIFSQ NPKEHELHVK EVLQRLMDMQ
LFCKGSKCKF HQTTVEYLGI IVSDKGFSLD KLKIQAVQEW PTPTTVKQVQ SFLGFANFVR
RFVANFSQIA RPLHNLVKKE VKWQWTDKEE NAFRDLQQAI ITAPVIVHAD PVKPYFLETD
ASGAALGSVL SQRQDDGRLH PIGYLSESFK GAEQNYDTHD KELLAIIRSF EHWRIYLEGT
TLPITVFTDH RNLEYWKESR TFNRRHARWH LLLAGFHFQI MYRPGKQSTK PDALSQRADH
LDIPPADQSM LPESVFANVS LILPEKEIQA RIERSLDQDE SLNEILEHLQ NESSAPASVK
RAFKDYEMEA GLLFYQGRIL VPDAGDLRED LLRIYHDSPM AGHPGRQRTL ELLSRAYYWP
GIWADVYLHV DGCETCQRIR LPKAKLIPAQ PLEIPLRPWQ HVSYDMITDL PKDGQYDCIL
VIVDSFTKFV VLVPVSNKLK APELAEIFLK RVWKQYGLPE KTVSDRGTVF NNKFLRALYK
RLGIDPHFSS AYHPQSDGQT ERVNPTIEHF LRAYASVNQS DWVKWLPMTE FAYNNATHSS
TGRSPFMALY GWQPTLTPSN VETNVPEANN LANTIKKQWE EVAAALRQSK SRLVEGQNQE
VPLSFEIGEE AWLDAKNVNL KTKSDKLTER CLGPFKVTEK ISERAYRLEL PETMRIHDVF
YVGLLSKVKR NELQAWENRP PPITVDGEEE YEVEGIMDSR ENKGKWEYLV KWKGYGPEES
TWEPKANLKN AAKHLKKYEK ILRQKSLDAA KGL
//
