ID M5C3B6_THACB Unreviewed; 503 AA.
AC M5C3B6;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE SubName: Full=Retrotransposable element Tf2 155 kDa protein type 3 {ECO:0000313|EMBL:CCO34453.1};
GN ORFNames=BN14_08551 {ECO:0000313|EMBL:CCO34453.1};
OS Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) (Lettuce bottom
OS rot fungus) (Rhizoctonia solani).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Cantharellales; Ceratobasidiaceae; Rhizoctonia; Rhizoctonia solani AG-1.
OX NCBI_TaxID=1108050 {ECO:0000313|EMBL:CCO34453.1, ECO:0000313|Proteomes:UP000012065};
RN [1] {ECO:0000313|EMBL:CCO34453.1, ECO:0000313|Proteomes:UP000012065}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AG1-IB / isolate 7/3/14 {ECO:0000313|Proteomes:UP000012065};
RX PubMed=23280342; DOI=10.1016/j.jbiotec.2012.12.010;
RA Wibberg D.W., Jelonek L.J., Rupp O.R., Hennig M.H., Eikmeyer F.E.,
RA Goesmann A.G., Hartmann A.H., Borriss R.B., Grosch R.G., Puehler A.P.,
RA Schlueter A.S.;
RT "Establishment and interpretation of the genome sequence of the
RT phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14.";
RL J. Biotechnol. 0:0-0(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCO34453.1}.
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DR EMBL; CAOJ01013126; CCO34453.1; -; Genomic_DNA.
DR AlphaFoldDB; M5C3B6; -.
DR HOGENOM; CLU_000384_6_12_1; -.
DR Proteomes; UP000012065; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 2.40.50.40; -; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR017984; Chromo_dom_subgr.
DR InterPro; IPR023780; Chromo_domain.
DR InterPro; IPR023779; Chromodomain_CS.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR45835:SF106; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR45835; YALI0A06105P; 1.
DR Pfam; PF00385; Chromo; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF00665; rve; 1.
DR PRINTS; PR00504; CHROMODOMAIN.
DR SMART; SM00298; CHROMO; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS00598; CHROMO_1; 1.
DR PROSITE; PS50013; CHROMO_2; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464}.
FT DOMAIN 145..304
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT DOMAIN 441..490
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
SQ SEQUENCE 503 AA; 57729 MW; 5B278F405C2DC611 CRC64;
MLPESVFANV SLILPEKEIQ ARIEKSLDQD ESLNEILEHL RNESSAPASI KRAFKDYEME
AGLLFYQGRI LVPDAGDLRE DLLRIYHDSP MAGHPGRQRT LELLSRAYYW PGVRADVYLH
VDGCETCQRI RLPKTKLIPA QPLEIPSRPW QHVSYDMITD LPKDGSYDCI LVIVDSFTKF
VVLVPVSKKL KAPELAEIFL NRVWKQYGLP EKTVSDRGTV FNNKFLRALY KRLGIDPHFS
SAYHPQSDGQ TERVNPTIEH FLRAYASVNQ SDWVKWLPMT EFAYNNATHS ATGRSPFMAL
YGWQPTLTPS NVQTNVPEAN DLANTIKKQW EEVASALRQS KSRLEGQGQE VPVSFDIGEE
AWLDAKNVNL KTKSDKLTER RLGPFEVIEK ISDRAYRLKL PDTMKIHDVF YVGLLSKVKR
NELQAWENRP PPITVDGEEE YEVEGIMDSR ENKGKWEYLV KWKGYGPEES TWEPKANLQN
AAKHLKKYEK ILRQKSLDAA KGL
//
