ID M5CGA2_THACB Unreviewed; 579 AA.
AC M5CGA2;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE SubName: Full=Retrotransposable element Tf2 155 kDa protein type 1 {ECO:0000313|EMBL:CCO35762.1};
GN ORFNames=BN14_09882 {ECO:0000313|EMBL:CCO35762.1};
OS Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) (Lettuce bottom
OS rot fungus) (Rhizoctonia solani).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Cantharellales; Ceratobasidiaceae; Rhizoctonia; Rhizoctonia solani AG-1.
OX NCBI_TaxID=1108050 {ECO:0000313|EMBL:CCO35762.1, ECO:0000313|Proteomes:UP000012065};
RN [1] {ECO:0000313|EMBL:CCO35762.1, ECO:0000313|Proteomes:UP000012065}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AG1-IB / isolate 7/3/14 {ECO:0000313|Proteomes:UP000012065};
RX PubMed=23280342; DOI=10.1016/j.jbiotec.2012.12.010;
RA Wibberg D.W., Jelonek L.J., Rupp O.R., Hennig M.H., Eikmeyer F.E.,
RA Goesmann A.G., Hartmann A.H., Borriss R.B., Grosch R.G., Puehler A.P.,
RA Schlueter A.S.;
RT "Establishment and interpretation of the genome sequence of the
RT phytopathogenic fungus Rhizoctonia solani AG1-IB isolate 7/3/14.";
RL J. Biotechnol. 0:0-0(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CCO35762.1}.
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DR EMBL; CAOJ01015075; CCO35762.1; -; Genomic_DNA.
DR AlphaFoldDB; M5CGA2; -.
DR HOGENOM; CLU_000384_33_8_1; -.
DR Proteomes; UP000012065; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd00303; retropepsin_like; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 2.40.70.10; Acid Proteases; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR001878; Znf_CCHC.
DR PANTHER; PTHR24559:SF425; RT_RNASEH DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24559; TRANSPOSON TY3-I GAG-POL POLYPROTEIN; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50878; RT_POL; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 109..122
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 322..501
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT REGION 52..89
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 65..82
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 579 AA; 66246 MW; 2BCA3E69856ECA2E CRC64;
MSLDWNDAAL RAQFYKGLHW HVKQQLAQKE NQPQDLEDLI AAAIRIDNVR RELEISRPPR
ENRPKPAATT TTSRTANTGT PRIDSDRLKA DPNYVSEAER QRRRDEKLCI KCGKSGHRFA
ECHTGWKGPD KGKETAKVAE AEPEKEASTN FISPSTVEKL RLPTITLDQP RTVTMLDGST
PQTGKIWKKT KIEFTYDGHA MTHEFLVSPI GHHSAILGIK WLEQEKPEIN WSHQTLTFPI
PTPEVAHIAQ EEEADPEPLK DIPAQYHEFA KVFGEEEFNK LPPHRSYDIE IELTEDGPLN
SPLYSMTNAE SVTLKQWLED ELKAGKIRPL KSPISSPVMF VPKKDGSRRL VVDYRKLNAR
SKKNVYPLPR PDNLMSKLRG AKLFTKLDLR WGYNNVRVKE GDEWKTAFRT KYGLFETLVM
PFGLSGAPGA FQAMMNEVFQ DLLDVTVIIY LDDILIFSQN PADHEKHVKE VLRRLQDMQL
FCKGSKCEFH QTTMEYLGII VSDKGFSLDK LKIQAVQEWP TPTTVKQVQS FLGFANFVRR
FVANFSQIAR PLHNLVKRRS NGNGQIKKKA LLGNYRRPL
//