ID M5U2W2_9BACT Unreviewed; 443 AA.
AC M5U2W2;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=RNA polymerase subunit alpha domain protein {ECO:0000313|EMBL:EMI55619.1};
GN ORFNames=RSSM_02904 {ECO:0000313|EMBL:EMI55619.1};
OS Rhodopirellula sallentina SM41.
OC Bacteria; Planctomycetota; Planctomycetia; Pirellulales; Pirellulaceae;
OC Rhodopirellula.
OX NCBI_TaxID=1263870 {ECO:0000313|EMBL:EMI55619.1, ECO:0000313|Proteomes:UP000011885};
RN [1] {ECO:0000313|EMBL:EMI55619.1, ECO:0000313|Proteomes:UP000011885}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SM41 {ECO:0000313|EMBL:EMI55619.1,
RC ECO:0000313|Proteomes:UP000011885};
RX PubMed=23273849;
RA Wegner C.E., Richter-Heitmann T., Klindworth A., Klockow C., Richter M.,
RA Achstetter T., Glockner F.O., Harder J.;
RT "Expression of sulfatases in Rhodopirellula baltica and the diversity of
RT sulfatases in the genus Rhodopirellula.";
RL Mar. Genomics 0:0-0(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EMI55619.1}.
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DR EMBL; ANOH01000206; EMI55619.1; -; Genomic_DNA.
DR RefSeq; WP_008679357.1; NZ_ANOH01000206.1.
DR AlphaFoldDB; M5U2W2; -.
DR PATRIC; fig|1263870.3.peg.3084; -.
DR OrthoDB; 228958at2; -.
DR Proteomes; UP000011885; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 2.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR011260; RNAP_asu_C.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR44858; TETRATRICOPEPTIDE REPEAT PROTEIN 6; 1.
DR PANTHER; PTHR44858:SF1; UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED; 1.
DR Pfam; PF03118; RNA_pol_A_CTD; 2.
DR Pfam; PF13432; TPR_16; 1.
DR Pfam; PF13174; TPR_6; 1.
DR Pfam; PF13181; TPR_8; 1.
DR SMART; SM00028; TPR; 4.
DR SUPFAM; SSF47789; C-terminal domain of RNA polymerase alpha subunit; 2.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50005; TPR; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000011885};
KW TPR repeat {ECO:0000256|PROSITE-ProRule:PRU00339}.
FT REPEAT 225..258
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
FT DOMAIN 287..346
FT /note="RNA polymerase alpha subunit C-terminal"
FT /evidence="ECO:0000259|Pfam:PF03118"
FT DOMAIN 372..434
FT /note="RNA polymerase alpha subunit C-terminal"
FT /evidence="ECO:0000259|Pfam:PF03118"
SQ SEQUENCE 443 AA; 49287 MW; 2F75284D22BF22A4 CRC64;
MSEVDLEVLD LKQMVLASNA FGPNDVAEIR KAVTENYGHF SELRDATQEM EQDTALTPAN
RTKMGVCQFL LGRFSDALET LSSADGSAMA LFYGARCRFE LGQYQESIEA YEKAKVSGYN
EDQCKIGIAE AKRYAGEIEE AMAILDDIFG PAEQTADYMY QRAATAALIG GRMEEAINLY
QRAVATDENH AGALFGLALE NDRLGNDDEA LQLYERAAKA FPTGLGALTN LGVMYEDRNE
YDKAQMCYKR ILDCFPGHPR TALYMKDASA TGNMLYDEEA QRRNDRLAQI LNMPVSNFEL
SVRSRNCLQK MGIETIGELT RHTEQELLGS KNFGETSLVE IREMLSQKGL SLGQFAGEKK
SNDPPIDTSH MSADEQALLE RPIADLNLSV RARKCMTRLQ INTIGELIRK TGDDMLECKN
FGVTSLNEVR EKLGDLGLKM RGD
//
