ID M5VWT4_PRUPE Unreviewed; 1369 AA.
AC M5VWT4;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE RecName: Full=Pre-mRNA polyadenylation factor Fip1 domain-containing protein {ECO:0000259|Pfam:PF05182};
GN ORFNames=PRUPE_7G260100 {ECO:0000313|EMBL:ONH98649.1};
OS Prunus persica (Peach) (Amygdalus persica).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus.
OX NCBI_TaxID=3760 {ECO:0000313|EMBL:ONH98649.1, ECO:0000313|Proteomes:UP000006882};
RN [1] {ECO:0000313|EMBL:ONH98649.1, ECO:0000313|Proteomes:UP000006882}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nemared {ECO:0000313|Proteomes:UP000006882};
RX PubMed=23525075; DOI=10.1038/ng.2586;
RA Verde I., Abbott A.G., Scalabrin S., Jung S., Shu S., Marroni F.,
RA Zhebentyayeva T., Dettori M.T., Grimwood J., Cattonaro F., Zuccolo A.,
RA Rossini L., Jenkins J., Vendramin E., Meisel L.A., Decroocq V.,
RA Sosinski B., Prochnik S., Mitros T., Policriti A., Cipriani G., Dondini L.,
RA Ficklin S., Goodstein D.M., Xuan P., Del Fabbro C., Aramini V., Copetti D.,
RA Gonzalez S., Horner D.S., Falchi R., Lucas S., Mica E., Maldonado J.,
RA Lazzari B., Bielenberg D., Pirona R., Miculan M., Barakat A., Testolin R.,
RA Stella A., Tartarini S., Tonutti P., Arus P., Orellana A., Wells C.,
RA Main D., Vizzotto G., Silva H., Salamini F., Schmutz J., Morgante M.,
RA Rokhsar D.S.;
RT "The high-quality draft genome of peach (Prunus persica) identifies unique
RT patterns of genetic diversity, domestication and genome evolution.";
RL Nat. Genet. 45:487-494(2013).
RN [2] {ECO:0000313|EMBL:ONH98649.1}
RP NUCLEOTIDE SEQUENCE.
RA Verde I., Jenkins J., Dondini L., Micali S., Pagliarani G., Vendramin E.,
RA Paris R., Aramini V., Gazza L., Rossini L., Bassi D., Troggio M., Shu S.,
RA Grimwood J.H., Tartarini S., Dettori M.T., Schmutz J.;
RT "WGS assembly of Prunus persica.";
RL Submitted (DEC-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the FIP1 family.
CC {ECO:0000256|ARBA:ARBA00007459}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM007657; ONH98647.1; -; Genomic_DNA.
DR EMBL; CM007657; ONH98648.1; -; Genomic_DNA.
DR EMBL; CM007657; ONH98649.1; -; Genomic_DNA.
DR RefSeq; XP_007204683.1; XM_007204621.1.
DR STRING; 3760.M5VWT4; -.
DR EnsemblPlants; ONH98647; ONH98647; PRUPE_7G260100.
DR EnsemblPlants; ONH98648; ONH98648; PRUPE_7G260100.
DR EnsemblPlants; ONH98649; ONH98649; PRUPE_7G260100.
DR GeneID; 18769501; -.
DR Gramene; ONH98647; ONH98647; PRUPE_7G260100.
DR Gramene; ONH98648; ONH98648; PRUPE_7G260100.
DR Gramene; ONH98649; ONH98649; PRUPE_7G260100.
DR KEGG; pper:18769501; -.
DR eggNOG; KOG1049; Eukaryota.
DR HOGENOM; CLU_006491_1_0_1; -.
DR OMA; MEDRDDI; -.
DR OrthoDB; 400357at2759; -.
DR Proteomes; UP000006882; Chromosome g7.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR InterPro; IPR007854; Fip1_dom.
DR InterPro; IPR044976; FIPS5-like.
DR PANTHER; PTHR36884; FIP1[III]-LIKE PROTEIN; 1.
DR PANTHER; PTHR36884:SF1; FIP1[III]-LIKE PROTEIN-RELATED; 1.
DR Pfam; PF05182; Fip1; 1.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000006882}.
FT DOMAIN 377..419
FT /note="Pre-mRNA polyadenylation factor Fip1"
FT /evidence="ECO:0000259|Pfam:PF05182"
FT REGION 1..101
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 131..216
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 523..1307
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1339..1369
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 16..30
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 70..89
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 539..553
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 573..592
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 616..630
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 632..668
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 669..684
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 723..740
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 764..781
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 790..828
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 843..1155
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1163..1177
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1194..1307
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1352..1369
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1369 AA; 153962 MW; 10104B5878B7B06B CRC64;
MEDDDEFGDL YTDVLRPFES SQSSSAPQPH QPSTAPQPHR PIDLNLRNEE DEILYAAPHS
NPSLPHPPNT QTLAPADSVP ANSTKDADSA VGSRGLEDKG VELPKVDSVD SNIGGKTVDL
MDKDVNFDIE EDNNETDDMG LDPVIPGLSE TLPVNDSAVN IGNPEVSRKE GERGEDDWDS
DDSEDDLQIV LNDNDHGPMA MERGGIGGNA EGGDDDDDED GLVIVADGEL NQPMEEQEWG
EDGAQAAEGE RKEMGEAGKA VGGGSVVAPP KVGYSNHGYH PFHSQFKYVR PGAVPMTGPA
TSSPGGVPGQ VRPLVNVGPV AGRGRGDWRP TGLKNATPLQ KNFHSGFGMP GWGNNMGGRG
FGGGLEFTLP SHKTIFDVDI DGFEEKPWKY PGVDTSDFFN FGLNEESWKD YCKQLEQLRL
ESTMQSKIRV YESGRTEQEY DPDLPPELAA ATGIHDFPAE NANPGKSDVG QSDLVKGSAR
LRPPIPTGRA IQVEGGYGER LPSIDTRPPR IRDSDAIIEI VLQDSLDDDS SAGNGIPEKT
ENDRPREDFG RSAVGEGDLA QVDSVYFDGF PASYNDRKRE PVGRKIPFHD SIPEEEGILP
FPPEAPVPYT GSGGETPSYP GGSFGSTFEE RGTQGRARDR SPRVTPSRNT RDKKFLDNQK
EESVESMDGK RSPQISSPVT NRGAHESSVE CRDSDQDEPV LADGSSGMEK EEMATVTVND
ELQDGPPKHK KLSSRVEQSA DEELDDGEDS KAARSSDNSK ARSGSSKDYQ KWRDGVEEEV
IQGRSTHMGG IKRHLNENEQ GFQRKNRDGR QEPDRSHTVV KGREGSYPYR DWDTSSAHPL
QLKNDGLHRR KERDNLDGPW QRRDDEPYGR RIRTEETRKR ERGDEMGSRH RSKARESERS
DKDEHLQSRK QLDNGSYRVY HDKDVGSRPR EREGSLKGID DYHGKRRKDE EYMRRDHIDK
EDFVHGHRES ASRRKRERDE ILDQRKRDDQ QRVRDNLDDP HSVRHKDESW LQRERGDRQR
EREEWHRVKQ SHEENIPKRE RDEGRASIRG GRGAEDKAWV GHTRAKDESK GSDKEHQYKD
TVRHSEPSKR RDRVEEESSN HRGREDVYGR GNQLNNDEKR SGKERSSTRN ERADNQKLHD
RRPKDNTRKN KESEIADNST TVTSKRHQED QSGHSKEMGL KGTRVQGTGE GIPQHRHSSK
RHKEDASSDD EQQDLRRGRS KLERWTSHKE RDFSINSKSS LKLKELDRSH NRGSSDASKL
PEESSKPVEA VDNQHSLVEE KDAGDQDIKD ADTKQVDADT KPLEDRHLDT VEKLKKRSER
FRLPMPSEKE AATIKKLESE VLPTTNSETP VESEIKPERP ARKRRWISN
//
