ID M5XMP6_PRUPE Unreviewed; 611 AA.
AC M5XMP6;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE RecName: Full=XPG-I domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=PRUPE_2G154000 {ECO:0000313|EMBL:ONI22838.1};
OS Prunus persica (Peach) (Amygdalus persica).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus.
OX NCBI_TaxID=3760 {ECO:0000313|EMBL:ONI22838.1, ECO:0000313|Proteomes:UP000006882};
RN [1] {ECO:0000313|EMBL:ONI22838.1, ECO:0000313|Proteomes:UP000006882}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nemared {ECO:0000313|Proteomes:UP000006882};
RX PubMed=23525075; DOI=10.1038/ng.2586;
RA Verde I., Abbott A.G., Scalabrin S., Jung S., Shu S., Marroni F.,
RA Zhebentyayeva T., Dettori M.T., Grimwood J., Cattonaro F., Zuccolo A.,
RA Rossini L., Jenkins J., Vendramin E., Meisel L.A., Decroocq V.,
RA Sosinski B., Prochnik S., Mitros T., Policriti A., Cipriani G., Dondini L.,
RA Ficklin S., Goodstein D.M., Xuan P., Del Fabbro C., Aramini V., Copetti D.,
RA Gonzalez S., Horner D.S., Falchi R., Lucas S., Mica E., Maldonado J.,
RA Lazzari B., Bielenberg D., Pirona R., Miculan M., Barakat A., Testolin R.,
RA Stella A., Tartarini S., Tonutti P., Arus P., Orellana A., Wells C.,
RA Main D., Vizzotto G., Silva H., Salamini F., Schmutz J., Morgante M.,
RA Rokhsar D.S.;
RT "The high-quality draft genome of peach (Prunus persica) identifies unique
RT patterns of genetic diversity, domestication and genome evolution.";
RL Nat. Genet. 45:487-494(2013).
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DR EMBL; CM007652; ONI22838.1; -; Genomic_DNA.
DR RefSeq; XP_007219126.1; XM_007219064.1.
DR AlphaFoldDB; M5XMP6; -.
DR STRING; 3760.M5XMP6; -.
DR EnsemblPlants; ONI22838; ONI22838; PRUPE_2G154000.
DR GeneID; 18786363; -.
DR Gramene; ONI22838; ONI22838; PRUPE_2G154000.
DR KEGG; pper:18786363; -.
DR eggNOG; KOG2519; Eukaryota.
DR HOGENOM; CLU_013777_1_0_1; -.
DR OMA; RNLYFRT; -.
DR OrthoDB; 26655at2759; -.
DR Proteomes; UP000006882; Chromosome g2.
DR GO; GO:0005634; C:nucleus; IEA:EnsemblPlants.
DR GO; GO:0017108; F:5'-flap endonuclease activity; IBA:GO_Central.
DR GO; GO:0003690; F:double-stranded DNA binding; IEA:EnsemblPlants.
DR GO; GO:0003697; F:single-stranded DNA binding; IEA:EnsemblPlants.
DR GO; GO:0009555; P:pollen development; IBA:GO_Central.
DR CDD; cd09869; PIN_GEN1; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.40.50.1010; 5'-nuclease; 1.
DR InterPro; IPR036279; 5-3_exonuclease_C_sf.
DR InterPro; IPR029060; PIN-like_dom_sf.
DR InterPro; IPR006086; XPG-I_dom.
DR InterPro; IPR006084; XPG/Rad2.
DR InterPro; IPR006085; XPG_DNA_repair_N.
DR PANTHER; PTHR11081; FLAP ENDONUCLEASE FAMILY MEMBER; 1.
DR PANTHER; PTHR11081:SF59; FLAP ENDONUCLEASE GEN-LIKE 1; 1.
DR Pfam; PF00867; XPG_I; 1.
DR Pfam; PF00752; XPG_N; 1.
DR PRINTS; PR00853; XPGRADSUPER.
DR SMART; SM00484; XPGI; 1.
DR SMART; SM00485; XPGN; 1.
DR SUPFAM; SSF47807; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR SUPFAM; SSF88723; PIN domain-like; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000006882}.
FT DOMAIN 1..96
FT /note="XPG N-terminal"
FT /evidence="ECO:0000259|SMART:SM00485"
FT DOMAIN 128..198
FT /note="XPG-I"
FT /evidence="ECO:0000259|SMART:SM00484"
SQ SEQUENCE 611 AA; 68990 MW; EC821E7F3D5EC1AD CRC64;
MGVGGKFWDL LKPYARHEGF DFLRNKRVAV DLSFWLVQHE TAIKDRARSP HLRLTFFRTI
NLFSKFGAFP VFVVDGSPSP LKSEARIARF FRSSGIDSSS LPVAGDGASV ERNSTFTKYI
QECVELLELL GMPVVKAKGE AEALCAQLDA EGHVDACITS DSDAFLFGAK CVIKTFQSNS
KEPFECYYMS DIEAGLGLKR KHLIAISLLV GNDYYLNGVQ GIGLDTALRI AQTFSEDEIL
NRLREIGNGD ASLLQGEIRS VDDSVPSPDG SSLKRKFSHC SFCGHPGSKR THFKSSCEYC
SSTMGEGCMK KSEGFKCSCS SCDMDRKEKE QKKQDNWRLK VLSKIALEPN FPNDAIIEMY
LCNSHGYFTE NDGPCISWGS PKTEMVVDFL AYHQLWEPSY IRRRMLPMLS TIFLREMAKD
PLKSLLYGQY EFDSIDRLKI RYGHQFYVVK WKKSAPSLGC VSCTVPPEES DVQQDDVMEV
DESINPFDES DVPTIDINNG CCFLLTDENM DLVHAAFPEE VDRFLQEKEL KELKRRKTEK
PETAGSRGVQ LNITEFYRSA KVYETEPGEI LTKKTEPGEI LSSQRAETSK EKRKPSSSNL
PKSVRRRLLF D
//
