GenomeNet

Database: UniProt
Entry: M6ZYP3_9ACTN
LinkDB: M6ZYP3_9ACTN
Original site: M6ZYP3_9ACTN 
ID   M6ZYP3_9ACTN            Unreviewed;       645 AA.
AC   M6ZYP3;
DT   29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT   09-DEC-2015, sequence version 2.
DT   24-JAN-2024, entry version 33.
DE   SubName: Full=Succinate dehydrogenase {ECO:0000313|EMBL:EMP11533.2};
DE            EC=1.3.5.1 {ECO:0000313|EMBL:EMP11533.2};
GN   Name=sdhA {ECO:0000313|EMBL:EMP11533.2};
GN   ORFNames=ISGA_5458 {ECO:0000313|EMBL:EMP11533.2};
OS   Gordonia sp. NB41Y.
OC   Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Gordoniaceae;
OC   Gordonia.
OX   NCBI_TaxID=875808 {ECO:0000313|EMBL:EMP11533.2, ECO:0000313|Proteomes:UP000011989};
RN   [1] {ECO:0000313|EMBL:EMP11533.2, ECO:0000313|Proteomes:UP000011989}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NB4-1Y {ECO:0000313|EMBL:EMP11533.2,
RC   ECO:0000313|Proteomes:UP000011989};
RX   PubMed=23744905; DOI=10.1099/mic.0.068932-0;
RA   Van Hamme J.D., Bottos E.M., Bilbey N.J., Brewer S.E.;
RT   "Genomic and proteomic characterization of Gordonia sp. NB4-1Y in relation
RT   to 6 : 2 fluorotelomer sulfonate biodegradation.";
RL   Microbiology 159:1618-1628(2013).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EMP11533.2}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; APHK02000077; EMP11533.2; -; Genomic_DNA.
DR   RefSeq; WP_053777923.1; NZ_CP132196.1.
DR   AlphaFoldDB; M6ZYP3; -.
DR   STRING; 1241906.ISGA_5458; -.
DR   OrthoDB; 9805351at2; -.
DR   Proteomes; UP000011989; Unassembled WGS sequence.
DR   GO; GO:0102040; F:fumarate reductase (menaquinone); IEA:UniProtKB-EC.
DR   GO; GO:0033765; F:steroid dehydrogenase activity, acting on the CH-CH group of donors; IEA:UniProt.
DR   GO; GO:0008177; F:succinate dehydrogenase (ubiquinone) activity; IEA:UniProtKB-EC.
DR   GO; GO:0008202; P:steroid metabolic process; IEA:UniProt.
DR   Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 1.
DR   Gene3D; 1.20.58.100; Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain; 1.
DR   Gene3D; 3.90.700.10; Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain; 1.
DR   InterPro; IPR003953; FAD-binding_2.
DR   InterPro; IPR036188; FAD/NAD-bd_sf.
DR   InterPro; IPR037099; Fum_R/Succ_DH_flav-like_C_sf.
DR   InterPro; IPR015939; Fum_Rdtase/Succ_DH_flav-like_C.
DR   InterPro; IPR030664; SdhA/FrdA/AprA.
DR   InterPro; IPR011280; Succ_DH/Fum_Rdt_flav_su.
DR   InterPro; IPR027477; Succ_DH/fumarate_Rdtase_cat_sf.
DR   NCBIfam; TIGR01811; sdhA_Bsu; 1.
DR   PANTHER; PTHR11632; SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT; 1.
DR   PANTHER; PTHR11632:SF53; SUCCINATE DEHYDROGENASE FLAVOPROTEIN SUBUNIT; 1.
DR   Pfam; PF00890; FAD_binding_2; 1.
DR   Pfam; PF02910; Succ_DH_flav_C; 1.
DR   SUPFAM; SSF51905; FAD/NAD(P)-binding domain; 1.
DR   SUPFAM; SSF46977; Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain; 1.
DR   SUPFAM; SSF56425; Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain; 1.
PE   4: Predicted;
KW   Flavoprotein {ECO:0000256|ARBA:ARBA00022630};
KW   Oxidoreductase {ECO:0000256|ARBA:ARBA00023002,
KW   ECO:0000313|EMBL:EMP11533.2};
KW   Reference proteome {ECO:0000313|Proteomes:UP000011989}.
FT   DOMAIN          44..449
FT                   /note="FAD-dependent oxidoreductase 2 FAD binding"
FT                   /evidence="ECO:0000259|Pfam:PF00890"
FT   DOMAIN          511..644
FT                   /note="Fumarate reductase/succinate dehydrogenase
FT                   flavoprotein-like C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF02910"
FT   ACT_SITE        338
FT                   /note="Proton acceptor"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR630664-50"
SQ   SEQUENCE   645 AA;  70027 MW;  0AB8F1A03C3609D3 CRC64;
     MSIGPTIEQL LDSGVPEGDP ATAWQRRRDA YRLVGPLNRG KFTVIVVGTG LAGAGCAAAL
     GELGYDVHAF TFHDAPRRAH SVAAQGGINA ARARKVDNDS IRRFVVDTVK GGDFRAREAD
     AFRLAEESIR VIDHLDAIGA PFAREYGGSL ATRSFGGVQV SRTYYTRGQT GQQLQVAASQ
     ALLRQVAAGS VTLHTRSEML DLIVADGRAQ GIVVRDLVTG RIGARTAHAV VLATGGYGTV
     FFQSTLARNS NATAAWRAHR RGALMASPSF IQFHPTALPV SAPWQTKTTL MSESLRNDGR
     IWVPRTAGDE RAANDIPDAD RDYYLERKYP AYGNLTPRDV ASRAAREQIE AGHGVGPLRN
     SVYLDFADAL ARLGRATIAE RYGNLFSMYH DATGENPYEV PMRIAPAAHF TMGGLWSDYD
     QMTSIPGLFV GGEAGWGYHG ANRLGANSLL SACVDGWFTL PYSIPNYLAP LLGEGRLPLD
     HDAVRAAVGA VTGRITDLLD VGGRTGPDRF HRRLGEILYA GCGVARSPAG LTSAIGEIRS
     LREQFWSDVR VVGSASEFNQ ELERAGRVAD FLELAELMCV DALDRDESCG AHFRVDHQTA
     QGEARRDDDH WCAVSAWETT TDGRHIRHRE PLAFDAVPLQ TRNYQ
//
DBGET integrated database retrieval system