ID M7MHD7_9FLAO Unreviewed; 232 AA.
AC M7MHD7;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 24-JAN-2024, entry version 50.
DE RecName: Full=Uridine phosphorylase {ECO:0000256|ARBA:ARBA00021980};
DE EC=2.4.2.3 {ECO:0000256|ARBA:ARBA00011888};
GN Name=deoD {ECO:0000313|EMBL:HCY82640.1};
GN ORFNames=D778_00945 {ECO:0000313|EMBL:EMQ94230.1}, DHV22_14140
GN {ECO:0000313|EMBL:HCY82640.1};
OS Xanthomarina gelatinilytica.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Xanthomarina.
OX NCBI_TaxID=1137281 {ECO:0000313|EMBL:EMQ94230.1, ECO:0000313|Proteomes:UP000012024};
RN [1] {ECO:0000313|EMBL:EMQ94230.1, ECO:0000313|Proteomes:UP000012024}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AK20 {ECO:0000313|EMBL:EMQ94230.1,
RC ECO:0000313|Proteomes:UP000012024};
RA Kumar R., Khatri I., Vaidya B., Subramanian S., Pinnaka A.;
RT "Genome assembly of Formosa sp. AK20.";
RL Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:HCY82640.1, ECO:0000313|Proteomes:UP000263268}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=UBA10227 {ECO:0000313|EMBL:HCY82640.1};
RX PubMed=30148503; DOI=.1038/nbt.4229;
RA Parks D.H., Chuvochina M., Waite D.W., Rinke C., Skarshewski A.,
RA Chaumeil P.A., Hugenholtz P.;
RT "A standardized bacterial taxonomy based on genome phylogeny substantially
RT revises the tree of life.";
RL Nat. Biotechnol. 36:996-1004(2018).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=phosphate + uridine = alpha-D-ribose 1-phosphate + uracil;
CC Xref=Rhea:RHEA:24388, ChEBI:CHEBI:16704, ChEBI:CHEBI:17568,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:57720; EC=2.4.2.3;
CC Evidence={ECO:0000256|ARBA:ARBA00001020};
CC -!- SIMILARITY: Belongs to the PNP/UDP phosphorylase family.
CC {ECO:0000256|ARBA:ARBA00010456}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EMQ94230.1}.
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DR EMBL; ANLA01000019; EMQ94230.1; -; Genomic_DNA.
DR EMBL; DPRK01000222; HCY82640.1; -; Genomic_DNA.
DR RefSeq; WP_007650961.1; NZ_ANLA01000019.1.
DR AlphaFoldDB; M7MHD7; -.
DR PATRIC; fig|1137281.3.peg.2377; -.
DR eggNOG; COG0813; Bacteria.
DR OrthoDB; 9782889at2; -.
DR Proteomes; UP000012024; Unassembled WGS sequence.
DR Proteomes; UP000263268; Unassembled WGS sequence.
DR GO; GO:0004731; F:purine-nucleoside phosphorylase activity; IEA:InterPro.
DR GO; GO:0009164; P:nucleoside catabolic process; IEA:UniProt.
DR CDD; cd09006; PNP_EcPNPI-like; 1.
DR Gene3D; 3.40.50.1580; Nucleoside phosphorylase domain; 1.
DR HAMAP; MF_01627; Pur_nucleosid_phosp; 1.
DR InterPro; IPR004402; DeoD-type.
DR InterPro; IPR018016; Nucleoside_phosphorylase_CS.
DR InterPro; IPR000845; Nucleoside_phosphorylase_d.
DR InterPro; IPR035994; Nucleoside_phosphorylase_sf.
DR NCBIfam; TIGR00107; deoD; 1.
DR PANTHER; PTHR43691:SF11; FI09636P-RELATED; 1.
DR PANTHER; PTHR43691; URIDINE PHOSPHORYLASE; 1.
DR Pfam; PF01048; PNP_UDP_1; 1.
DR SUPFAM; SSF53167; Purine and uridine phosphorylases; 1.
DR PROSITE; PS01232; PNP_UDP_1; 1.
PE 3: Inferred from homology;
KW Glycosyltransferase {ECO:0000256|ARBA:ARBA00022676};
KW Reference proteome {ECO:0000313|Proteomes:UP000012024};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 16..223
FT /note="Nucleoside phosphorylase"
FT /evidence="ECO:0000259|Pfam:PF01048"
SQ SEQUENCE 232 AA; 25361 MW; C084A548470DC3A2 CRC64;
MSVHIEAKKG EIAETILLPG DPLRAKWIAE TFLDNPVCFN RVRGMLGYTG TYNGKPVSVM
GTGMGVPSIS IYAHELITEY GVKNLIRVGS SGSYQKHIKI RDIVLAMAAS SNSGVNELRF
GGADYAPTAD FGLFQKAVEI AKKKNIPLKA GNVFTSDEFY ADDFESYKKW SKFGVLCVEM
ETAGLYTVAA KHNVNALTIL TISDSLVTGE RTTSKERETT FKEMVDIALE LA
//