ID M7MZ23_9FLAO Unreviewed; 950 AA.
AC M7MZ23;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE SubName: Full=Carbamoyl-phosphate synthase large chain {ECO:0000313|EMBL:EMQ94749.1};
GN ORFNames=D778_00389 {ECO:0000313|EMBL:EMQ94749.1};
OS Xanthomarina gelatinilytica.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Xanthomarina.
OX NCBI_TaxID=1137281 {ECO:0000313|EMBL:EMQ94749.1, ECO:0000313|Proteomes:UP000012024};
RN [1] {ECO:0000313|EMBL:EMQ94749.1, ECO:0000313|Proteomes:UP000012024}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AK20 {ECO:0000313|EMBL:EMQ94749.1,
RC ECO:0000313|Proteomes:UP000012024};
RA Kumar R., Khatri I., Vaidya B., Subramanian S., Pinnaka A.;
RT "Genome assembly of Formosa sp. AK20.";
RL Submitted (DEC-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=2 ATP + hydrogencarbonate + NH4(+) = 2 ADP + carbamoyl
CC phosphate + 2 H(+) + phosphate; Xref=Rhea:RHEA:18029,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:17544, ChEBI:CHEBI:28938,
CC ChEBI:CHEBI:30616, ChEBI:CHEBI:43474, ChEBI:CHEBI:58228,
CC ChEBI:CHEBI:456216; EC=6.3.4.16;
CC Evidence={ECO:0000256|ARBA:ARBA00043687};
CC -!- SIMILARITY: Belongs to the CarB family.
CC {ECO:0000256|ARBA:ARBA00009799}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EMQ94749.1}.
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DR EMBL; ANLA01000014; EMQ94749.1; -; Genomic_DNA.
DR RefSeq; WP_007649875.1; NZ_ANLA01000014.1.
DR AlphaFoldDB; M7MZ23; -.
DR PATRIC; fig|1137281.3.peg.1821; -.
DR eggNOG; COG0458; Bacteria.
DR OrthoDB; 9804197at2; -.
DR Proteomes; UP000012024; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004088; F:carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:InterPro.
DR GO; GO:0006520; P:amino acid metabolic process; IEA:UniProt.
DR Gene3D; 3.40.50.20; -; 2.
DR Gene3D; 3.30.1490.20; ATP-grasp fold, A domain; 1.
DR Gene3D; 3.30.470.20; ATP-grasp fold, B domain; 2.
DR Gene3D; 1.10.1030.10; Carbamoyl-phosphate synthetase, large subunit oligomerisation domain; 1.
DR InterPro; IPR011761; ATP-grasp.
DR InterPro; IPR013815; ATP_grasp_subdomain_1.
DR InterPro; IPR006275; CarbamoylP_synth_lsu.
DR InterPro; IPR005480; CarbamoylP_synth_lsu_oligo.
DR InterPro; IPR036897; CarbamoylP_synth_lsu_oligo_sf.
DR InterPro; IPR005479; CbamoylP_synth_lsu-like_ATP-bd.
DR InterPro; IPR005483; CbamoylP_synth_lsu_CPSase_dom.
DR InterPro; IPR016185; PreATP-grasp_dom_sf.
DR NCBIfam; TIGR01369; CPSaseII_lrg; 1.
DR PANTHER; PTHR11405:SF5; CAD PROTEIN; 1.
DR PANTHER; PTHR11405; CARBAMOYLTRANSFERASE FAMILY MEMBER; 1.
DR Pfam; PF02786; CPSase_L_D2; 2.
DR Pfam; PF02787; CPSase_L_D3; 1.
DR PRINTS; PR00098; CPSASE.
DR SMART; SM01096; CPSase_L_D3; 1.
DR SMART; SM01209; GARS_A; 1.
DR SUPFAM; SSF48108; Carbamoyl phosphate synthetase, large subunit connection domain; 1.
DR SUPFAM; SSF56059; Glutathione synthetase ATP-binding domain-like; 2.
DR SUPFAM; SSF52440; PreATP-grasp domain; 2.
DR PROSITE; PS50975; ATP_GRASP; 2.
DR PROSITE; PS00866; CPSASE_1; 2.
DR PROSITE; PS00867; CPSASE_2; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|PROSITE-
KW ProRule:PRU00409}; Ligase {ECO:0000256|ARBA:ARBA00022598};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741, ECO:0000256|PROSITE-
KW ProRule:PRU00409}; Pyrimidine biosynthesis {ECO:0000256|ARBA:ARBA00022975};
KW Reference proteome {ECO:0000313|Proteomes:UP000012024};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 134..330
FT /note="ATP-grasp"
FT /evidence="ECO:0000259|PROSITE:PS50975"
FT DOMAIN 688..879
FT /note="ATP-grasp"
FT /evidence="ECO:0000259|PROSITE:PS50975"
SQ SEQUENCE 950 AA; 106521 MW; 44F280A085E40C88 CRC64;
MPKNSKLKSI LIIGSGPIVI GQACEFDYSG TQALRSLRED GIETILINSN PATIMTDPSM
ADHVYLLPLT TKSIIQILKE HPQIDAVLPT MGGQTALNLC IEADEKGIWK DFNVDIIGVD
IDAINITEDR EKFRELMLKI GIPMAPQATA TSYLQGKEIA QEFGFPLVIR ASFTLGGAGA
SFVYKEEEFD ELLTRGLEIS PIHEVMIDKA LIGWKEYELE LLRDANDNVV IICSIENMDP
MGIHTGDSIT VAPAMTLSDR TYQKMRDMAI HMMRSIGDFA GGCNVQFAVS PDDEENIIAI
EINPRVSRSS ALASKATGYP IAKVAAKLAI GYHLDELDNQ ITKSTSALFE PTLDYVIVKI
PRWNFDKFEG SDRTLGLQMK SVGEVMGIGR SFQEALHKAT QSLEIKRNGL GADGKGYKNY
DQIISKLTYA SWDRVFVIYD AIQMGIPLSR IHEITKIDMW FLKQYEELYH LEKEISNYSI
ETLNRELLLE AKQKGYGDRQ IAHMLNCLES QVYKKREELG IKRVYKLVDT CAAEFKAQTP
YYYSTFENEM ETADGTLYPH NESIVSDKKK IVVLGSGPNR IGQGIEFDYC CVHGVLAAAE
CGYETIMINC NPETVSTDFD TADKLYFEPV FWEHIYDIIK HEKPEGVIVQ LGGQTALKLA
EKLDRYGIKI IGTTYQSLDL AEDRGSFSKL LKENDIPYPK FDVATTAEEA LAVADKLDFP
ILVRPSYVLG GQGMKIVINK KELEEHVVDL LRSIPNNKLL LDHYLDGAIE AEADAICDGE
NVYIIGIMEH IEPCGIHSGD SNATLPPFNL GEFVMQQIKD HTKKIALALN TVGLINIQFA
IKDDIVFIIE ANPRASRTVP FISKAYGEPY VNYATKVMLG EKKVTDFNFN PQLKGYAIKQ
PVFSFNKFHN VNKKLGPEMK STGESILFIE SLKDDEFYNL YSRRKMYLSK
//