ID   M7YN13_TRIUA            Unreviewed;       684 AA.
AC   M7YN13;
DT   29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT   29-MAY-2013, sequence version 1.
DT   27-MAR-2024, entry version 56.
DE   SubName: Full=Phosphatase YidA {ECO:0000313|EMBL:EMS48742.1};
GN   ORFNames=TRIUR3_08074 {ECO:0000313|EMBL:EMS48742.1};
OS   Triticum urartu (Red wild einkorn) (Crithodium urartu).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX   NCBI_TaxID=4572 {ECO:0000313|EMBL:EMS48742.1};
RN   [1] {ECO:0000313|EMBL:EMS48742.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=23535596; DOI=10.1038/nature11997;
RA   Ling H.Q., Zhao S., Liu D., Wang J., Sun H., Zhang C., Fan H., Li D.,
RA   Dong L., Tao Y., Gao C., Wu H., Li Y., Cui Y., Guo X., Zheng S., Wang B.,
RA   Yu K., Liang Q., Yang W., Lou X., Chen J., Feng M., Jian J., Zhang X.,
RA   Luo G., Jiang Y., Liu J., Wang Z., Sha Y., Zhang B., Wu H., Tang D.,
RA   Shen Q., Xue P., Zou S., Wang X., Liu X., Wang F., Yang Y., An X., Dong Z.,
RA   Zhang K., Zhang X., Luo M.C., Dvorak J., Tong Y., Wang J., Yang H., Li Z.,
RA   Wang D., Zhang A., Wang J.;
RT   "Draft genome of the wheat A-genome progenitor Triticum urartu.";
RL   Nature 496:87-90(2013).
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC         Evidence={ECO:0000256|ARBA:ARBA00001947};
CC   -!- SIMILARITY: Belongs to the endoribonuclease YbeY family.
CC       {ECO:0000256|ARBA:ARBA00010875}.
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DR   EMBL; KD250138; EMS48742.1; -; Genomic_DNA.
DR   AlphaFoldDB; M7YN13; -.
DR   STRING; 4572.M7YN13; -.
DR   eggNOG; ENOG502QUN8; Eukaryota.
DR   OMA; ICIEEEM; -.
DR   GO; GO:0009507; C:chloroplast; IEA:EnsemblPlants.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.
DR   GO; GO:0004521; F:RNA endonuclease activity; IEA:EnsemblPlants.
DR   GO; GO:0009658; P:chloroplast organization; IEA:EnsemblPlants.
DR   GO; GO:1901259; P:chloroplast rRNA processing; IEA:EnsemblPlants.
DR   Gene3D; 3.30.1240.10; -; 1.
DR   Gene3D; 3.40.50.1000; HAD superfamily/HAD-like; 2.
DR   Gene3D; 3.40.390.30; Metalloproteases ('zincins'), catalytic domain; 1.
DR   HAMAP; MF_00009; Endoribonucl_YbeY; 1.
DR   InterPro; IPR036412; HAD-like_sf.
DR   InterPro; IPR023214; HAD_sf.
DR   InterPro; IPR023091; MetalPrtase_cat_dom_sf_prd.
DR   InterPro; IPR026960; RVT-Znf.
DR   InterPro; IPR002036; YbeY.
DR   NCBIfam; TIGR00043; rRNA maturation RNase YbeY; 1.
DR   PANTHER; PTHR46986; ENDORIBONUCLEASE YBEY, CHLOROPLASTIC; 1.
DR   PANTHER; PTHR46986:SF1; YBEY METALLOENDORIBONUCLEASE; 1.
DR   Pfam; PF08282; Hydrolase_3; 2.
DR   Pfam; PF02130; YbeY; 1.
DR   Pfam; PF13966; zf-RVT; 1.
DR   SUPFAM; SSF56784; HAD-like; 1.
DR   SUPFAM; SSF55486; Metalloproteases ('zincins'), catalytic domain; 1.
DR   PROSITE; PS01229; COF_2; 1.
PE   3: Inferred from homology;
KW   Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT   DOMAIN          131..208
FT                   /note="Reverse transcriptase zinc-binding"
FT                   /evidence="ECO:0000259|Pfam:PF13966"
SQ   SEQUENCE   684 AA;  75977 MW;  FA366C4BB5D70100 CRC64;
     MEGLRVSKLE EGQQWGKNTS LKDKVHWGRR PPFIGGGKSN RYVLSPHTNG TTAPRAVLPF
     RRKKQGKGAT KYEPWGGSIA YKRYYRSPQR CYRWRSRTRD QKRQAEQSMA AVKQKRYYCP
     TGAVLPLRRC TYSFLSSDHE IDLHTGDIWS PKAPIKVKIF GWLLCRDRLS TMANLLHKSI
     SPDSSCPLYG LTLEDASHLA ILCPCAAQNV IEIMKLNVPM AMKIALDGLL EYNYKTRDTS
     ISDVGKYEKV EVSVLLCNDN FIQNLNKEWR GKDCATDMLS VSQFIPDLDV PTLMLGDIVI
     SVETAARQAE ARGHTLLDEL RTLVVRGLLR LLGFDRQISD EAAMEMEKEE LLILKSLRWK
     GKGLAKNAPD LSKPNTETLD GTLLNSKSQV TARNAEALKE ARSRGVNIVI ATGKKKRFLQ
     DGIAPEVGNC RTDSPELERS SSENGVNESC RSRQTRPAAI DALNMVDLSG RNGIVSESSP
     GIFLQGLLVY GLKGREIYRN TLNQEVCREA FLYSLEHKIP LVAFSQDRCF SMFEHPLVDS
     LHDVYHEPKA EIVSSIDQLL GTAEIQKLVF IGTSEGVSST LRPYWTKAIE ERAGVLQAQP
     DMLELVPPAT SKGTGVKILL DHLCISPDEV MAIGDGENDI EMLQLASLGV ALANGAEKTK
     AVANVIGATN DEDGVAQAIY DYAF
//