ID M9L7R8_PAEPP Unreviewed; 217 AA.
AC M9L7R8;
DT 29-MAY-2013, integrated into UniProtKB/TrEMBL.
DT 29-MAY-2013, sequence version 1.
DT 24-JAN-2024, entry version 52.
DE SubName: Full=DNA-directed RNA polymerase {ECO:0000313|EMBL:GAC41057.1};
GN ORFNames=PPOP_0398 {ECO:0000313|EMBL:GAC41057.1};
OS Paenibacillus popilliae ATCC 14706.
OC Bacteria; Bacillota; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.
OX NCBI_TaxID=1212764 {ECO:0000313|EMBL:GAC41057.1, ECO:0000313|Proteomes:UP000029453};
RN [1] {ECO:0000313|EMBL:GAC41057.1, ECO:0000313|Proteomes:UP000029453}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 14706 {ECO:0000313|EMBL:GAC41057.1,
RC ECO:0000313|Proteomes:UP000029453};
RA Iiyama K., Mori K., Mon H., Chieda Y., Lee J.M., Kusakabe T., Tashiro K.,
RA Asano S., Yasunaga-Aoki C., Shimizu S.;
RT "Draft Genome Sequence of Paenibacillus popilliae ATCC 14706T.";
RL Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAC41057.1}.
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DR EMBL; BALG01000020; GAC41057.1; -; Genomic_DNA.
DR RefSeq; WP_006284327.1; NZ_BALG01000020.1.
DR AlphaFoldDB; M9L7R8; -.
DR OrthoDB; 9783788at2; -.
DR Proteomes; UP000029453; Unassembled WGS sequence.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR014218; RNA_pol_sigma-H.
DR InterPro; IPR016371; RNA_pol_sigma-H_factor.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR NCBIfam; TIGR02859; spore_sigH; 1.
DR PANTHER; PTHR30385:SF1; RNA POLYMERASE SIGMA-H FACTOR; 1.
DR PANTHER; PTHR30385; SIGMA FACTOR F FLAGELLAR; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR PIRSF; PIRSF002939; RNA_polymerase_sigma-H_factor; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
DR PROSITE; PS00622; HTH_LUXR_1; 1.
DR PROSITE; PS00715; SIGMA70_1; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW DNA-directed RNA polymerase {ECO:0000313|EMBL:GAC41057.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000029453};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 61..74
FT /note="RNA polymerase sigma-70"
FT /evidence="ECO:0000259|PROSITE:PS00715"
FT DOMAIN 178..205
FT /note="HTH luxR-type"
FT /evidence="ECO:0000259|PROSITE:PS00622"
SQ SEQUENCE 217 AA; 25032 MW; 5A74FCF62C47F36E CRC64;
MSVDLRALST PCSYERLSDE LLVDAVREGD SEALEYLINK YRNFVRAKAR SYFLIGADRE
DIVQEGMIGL YKSIRDFKGD KLASFKAFAE LCITRQIITA IKTATRQKHI PLNSYVSLDK
PIYDEDSDRT LLDIIGGSRV SDPEELIINQ EEFVGLEDKM AEILSDLERR VLMLYLDGRS
YQEIAVDLDR HVKSIDNALQ RVKRKLERYL ELRDGEE
//
