ID M9R4Z9_9RHOB Unreviewed; 463 AA.
AC M9R4Z9;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE RecName: Full=HTH cro/C1-type domain-containing protein {ECO:0000259|PROSITE:PS50943};
GN ORFNames=OAN307_c11410 {ECO:0000313|EMBL:AGI66843.1};
OS Octadecabacter antarcticus 307.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Octadecabacter.
OX NCBI_TaxID=391626 {ECO:0000313|EMBL:AGI66843.1, ECO:0000313|Proteomes:UP000005307};
RN [1] {ECO:0000313|EMBL:AGI66843.1, ECO:0000313|Proteomes:UP000005307}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=307 {ECO:0000313|EMBL:AGI66843.1,
RC ECO:0000313|Proteomes:UP000005307};
RX PubMed=23671678;
RA Vollmers J., Voget S., Dietrich S., Gollnow K., Smits M., Meyer K.,
RA Brinkhoff T., Simon M., Daniel R.;
RT "Poles Apart: Arctic and Antarctic Octadecabacter strains Share High Genome
RT Plasticity and a New Type of Xanthorhodopsin.";
RL PLoS ONE 8:E63422-E63422(2013).
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
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DR EMBL; CP003740; AGI66843.1; -; Genomic_DNA.
DR AlphaFoldDB; M9R4Z9; -.
DR STRING; 391626.OAN307_c11410; -.
DR KEGG; oat:OAN307_c11410; -.
DR eggNOG; COG1396; Bacteria.
DR eggNOG; COG3800; Bacteria.
DR HOGENOM; CLU_046383_0_0_5; -.
DR Proteomes; UP000005307; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF23; HTH-TYPE TRANSCRIPTIONAL REGULATOR PRPR; 1.
DR Pfam; PF13560; HTH_31; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 11..65
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 463 AA; 51124 MW; 8EF54FFCD2C95E9A CRC64;
MPKKVYAGAK LRELRQRLNM SQAVYAQHLG VSIPYLSQME NNNRPVSTTV VLALAQEFGF
DVTELQSGDE ARLVGDMREA LADPIFAGPT PPLADLRLAA SNAPALARAF LELHTAYRQT
HESLASLDEA LGREDSQLSP SPWEEVRDFF HYCDNYIDAV DHAAERFATK ADGDIDGAAR
RALAESGVRV VHYDDGAIRH YDPQTHVLSL STKSTPATQR FQLLLQVALI KQDKLLEATL
DLARFQSPQA RGIAKVGLAN YFAGAAMMPY RAFLAAAQET RHDLERLADQ FGASLEQVAH
RLSTLQRPSA KGIPFFFVRV DPAGTITKRH SATKLQFARF GGACPLWNVH SAFETPGRWL
RQLAQTPDGV RYFCLARDVS KPGGAWGIPT RRYAIGLGCE VKHASALVYA DHMMVEHAAA
FVPIGISCRI CERNACPHRS VPPLASQLRV DPNERGMLPY QLE
//
