ID M9RNY3_9RHOB Unreviewed; 466 AA.
AC M9RNY3;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 50.
DE SubName: Full=S6 modification enzyme rimK with an additional DUF785 domain {ECO:0000313|EMBL:AGI71470.1};
GN ORFNames=OA238_c13050 {ECO:0000313|EMBL:AGI71470.1};
OS Octadecabacter arcticus 238.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Octadecabacter.
OX NCBI_TaxID=391616 {ECO:0000313|EMBL:AGI71470.1, ECO:0000313|Proteomes:UP000004688};
RN [1] {ECO:0000313|EMBL:AGI71470.1, ECO:0000313|Proteomes:UP000004688}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=238 {ECO:0000313|EMBL:AGI71470.1,
RC ECO:0000313|Proteomes:UP000004688};
RX PubMed=23671678;
RA Vollmers J., Voget S., Dietrich S., Gollnow K., Smits M., Meyer K.,
RA Brinkhoff T., Simon M., Daniel R.;
RT "Poles Apart: Arctic and Antarctic Octadecabacter strains Share High Genome
RT Plasticity and a New Type of Xanthorhodopsin.";
RL PLoS ONE 8:E63422-E63422(2013).
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DR EMBL; CP003742; AGI71470.1; -; Genomic_DNA.
DR RefSeq; WP_015494674.1; NC_020908.1.
DR AlphaFoldDB; M9RNY3; -.
DR STRING; 391616.OA238_c13050; -.
DR KEGG; oar:OA238_c13050; -.
DR eggNOG; COG0189; Bacteria.
DR eggNOG; COG4067; Bacteria.
DR HOGENOM; CLU_045509_0_0_5; -.
DR OrthoDB; 3865600at2; -.
DR Proteomes; UP000004688; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0003824; F:catalytic activity; IEA:UniProt.
DR GO; GO:0046872; F:metal ion binding; IEA:InterPro.
DR GO; GO:0036211; P:protein modification process; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:UniProtKB-KW.
DR Gene3D; 3.40.50.20; -; 1.
DR Gene3D; 2.40.70.10; Acid Proteases; 1.
DR Gene3D; 3.30.1490.20; ATP-grasp fold, A domain; 1.
DR Gene3D; 3.30.470.20; ATP-grasp fold, B domain; 1.
DR InterPro; IPR011761; ATP-grasp.
DR InterPro; IPR013651; ATP-grasp_RimK-type.
DR InterPro; IPR013815; ATP_grasp_subdomain_1.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR008503; Put_Zn_protease.
DR InterPro; IPR041107; Rimk_N.
DR InterPro; IPR004666; Rp_bS6_RimK/Lys_biosynth_LsyX.
DR NCBIfam; TIGR00768; rimK_fam; 1.
DR PANTHER; PTHR21621; RIBOSOMAL PROTEIN S6 MODIFICATION PROTEIN; 1.
DR PANTHER; PTHR21621:SF7; RIBOSOMAL PROTEIN S6--L-GLUTAMATE LIGASE; 1.
DR Pfam; PF08443; RimK; 1.
DR Pfam; PF18030; Rimk_N; 1.
DR Pfam; PF05618; Zn_protease; 1.
DR SUPFAM; SSF50630; Acid proteases; 1.
DR SUPFAM; SSF56059; Glutathione synthetase ATP-binding domain-like; 1.
DR PROSITE; PS50975; ATP_GRASP; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|PROSITE-ProRule:PRU00409};
KW Nucleotide-binding {ECO:0000256|PROSITE-ProRule:PRU00409};
KW Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917};
KW Reference proteome {ECO:0000313|Proteomes:UP000004688}.
FT DOMAIN 268..451
FT /note="ATP-grasp"
FT /evidence="ECO:0000259|PROSITE:PS50975"
SQ SEQUENCE 466 AA; 50922 MW; 50C830C5E1AC5428 CRC64;
MNESTTIKLG WEEWFGLPDL GLPTIKAKVD TGARTSALHA FDIETFGPAS KPRVRFAIHP
VPDREDLTIP CSALVVDRRE VTSSNGETEM RYVIETTLDA GNGNSWPIEV TLTHRGGMSS
RMLLGRQALR DDVIVMPTER FLLPERSFDV YSAKRIKSVT PNRALRICVL SREPNSYSTK
RIVHEGEERG HTVEVIDTTR CYMAINALAP EIHYDGKRLP RYDAIIPRIG ATVTSYGTAV
LRQFETLGIY CVNGSAGITA SRDKLHAHQV LAGHKIGMPM TAFAASPKDT SNLIGLVGTA
PLIVKLLEST QGKGVVLAET KKAAESVIDA FRGLKANFLV QDFVKEASGE DIRCFVVAGK
VVAAMRRKSA GDDFRSNLHR GGTAESCKIS SEERRMAVKS AKAFNLGLAG VDLLRSNDGP
KILEVNSSPG FEGIENASKK NLAGQLFDHI EDQVRPAPLK ATRKKI
//
