GenomeNet

Database: UniProt
Entry: N1MPV8_9SPHN
LinkDB: N1MPV8_9SPHN
Original site: N1MPV8_9SPHN 
ID   N1MPV8_9SPHN            Unreviewed;       264 AA.
AC   N1MPV8;
DT   26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT   26-JUN-2013, sequence version 1.
DT   24-JAN-2024, entry version 41.
DE   SubName: Full=Transcriptional regulator, IclR family {ECO:0000313|EMBL:CCW19245.1};
GN   ORFNames=EBBID32_36110 {ECO:0000313|EMBL:CCW19245.1};
OS   Sphingobium indicum BiD32.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingobium.
OX   NCBI_TaxID=1301087 {ECO:0000313|EMBL:CCW19245.1, ECO:0000313|Proteomes:UP000013201};
RN   [1] {ECO:0000313|EMBL:CCW19245.1, ECO:0000313|Proteomes:UP000013201}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BiD32 {ECO:0000313|EMBL:CCW19245.1,
RC   ECO:0000313|Proteomes:UP000013201};
RA   Le V.;
RL   Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:CCW19245.1, ECO:0000313|Proteomes:UP000013201}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BiD32 {ECO:0000313|EMBL:CCW19245.1,
RC   ECO:0000313|Proteomes:UP000013201};
RA   Nielsen J.L., Zhou N.A., Kjeldal H.;
RT   "Bisphenol A degrading Sphingobium sp. strain BiD32.";
RL   Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:CCW19245.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CAVK010000183; CCW19245.1; -; Genomic_DNA.
DR   RefSeq; WP_006962428.1; NZ_CAVK010000183.1.
DR   AlphaFoldDB; N1MPV8; -.
DR   OrthoDB; 6057486at2; -.
DR   Proteomes; UP000013201; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   Gene3D; 3.30.450.40; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR029016; GAF-like_dom_sf.
DR   InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR   InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR   PANTHER; PTHR30136:SF7; HTH-TYPE TRANSCRIPTIONAL REGULATOR XYNR-RELATED; 1.
DR   Pfam; PF09339; HTH_IclR; 1.
DR   Pfam; PF01614; IclR; 1.
DR   SMART; SM00346; HTH_ICLR; 1.
DR   SUPFAM; SSF55781; GAF domain-like; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS51077; HTH_ICLR; 1.
DR   PROSITE; PS51078; ICLR_ED; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000013201};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          23..84
FT                   /note="HTH iclR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51077"
FT   DOMAIN          85..258
FT                   /note="IclR-ED"
FT                   /evidence="ECO:0000259|PROSITE:PS51078"
SQ   SEQUENCE   264 AA;  28929 MW;  1B478AF6C4240BF4 CRC64;
     MTGRKKASNA TEQPRKDAPT YLAPALEKGI DIIELLTTAP QGLTISDIAQ KLDRSISELF
     RVVVVLARRG WLAKDDGDRY RVAYHLLDVA HRATLAQELL HVAMPHMHIL ATDIRQSCHL
     VVPVEDHGLI VARQENPGAA GFALRVGTHI DLVASCSGRV LLAFMDDDAR REALGSRRSP
     PTAELAAVKR HGRARMESRR LAGVLDLGCP VFGFDGRIVA ALTVPYLTPI DQRDHPSLEE
     SHNRIEQTAQ RISRELGWAG GTGV
//
DBGET integrated database retrieval system