ID   N2IVD9_9PSED            Unreviewed;       609 AA.
AC   N2IVD9;
DT   26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT   26-JUN-2013, sequence version 1.
DT   27-MAR-2024, entry version 30.
DE   SubName: Full=Conjugative coupling factor TraD, SXT/TOL subfamily {ECO:0000313|EMBL:ENA27546.1};
GN   ORFNames=HMPREF1487_09202 {ECO:0000313|EMBL:ENA27546.1};
OS   Pseudomonas sp. HPB0071.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=1203578 {ECO:0000313|EMBL:ENA27546.1, ECO:0000313|Proteomes:UP000017050};
RN   [1] {ECO:0000313|EMBL:ENA27546.1, ECO:0000313|Proteomes:UP000017050}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HPB0071 {ECO:0000313|EMBL:ENA27546.1,
RC   ECO:0000313|Proteomes:UP000017050};
RG   The Broad Institute Genome Sequencing Platform;
RA   Earl A., Ward D., Feldgarden M., Gevers D., Schmidt T., Dover J., Dai D.,
RA   Walker B., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA   Abouelleil A., Alvarado L., Arachchi H.M., Berlin A.M., Chapman S.B.,
RA   Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M., Howarth C.,
RA   Imamovic A., Larimer J., McCowan C., Murphy C., Neiman D., Pearson M.,
RA   Priest M., Roberts A., Saif S., Shea T., Sisk P., Sykes S., Wortman J.,
RA   Nusbaum C., Birren B.;
RT   "The Genome Sequence of Pseudomonas sp. HPB0071.";
RL   Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:ENA27546.1}.
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DR   EMBL; AQFP01000022; ENA27546.1; -; Genomic_DNA.
DR   RefSeq; WP_010799355.1; NZ_KI517369.1.
DR   AlphaFoldDB; N2IVD9; -.
DR   PATRIC; fig|1203578.3.peg.4929; -.
DR   HOGENOM; CLU_024857_0_0_6; -.
DR   OrthoDB; 7817736at2; -.
DR   Proteomes; UP000017050; Unassembled WGS sequence.
DR   CDD; cd01127; TrwB_TraG_TraD_VirD4; 2.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR022458; Conjugative_coupling_TraG/TraD.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR019476; T4SS_TraD_DNA-bd.
DR   InterPro; IPR032689; TraG-D_C.
DR   NCBIfam; TIGR03743; SXT_TraD; 1.
DR   PANTHER; PTHR30121:SF6; TYPE IV SECRETION SYSTEM PROTEIN CAGE; 1.
DR   PANTHER; PTHR30121; UNCHARACTERIZED PROTEIN YJGR-RELATED; 1.
DR   Pfam; PF12696; TraG-D_C; 1.
DR   Pfam; PF10412; TrwB_AAD_bind; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000017050}.
FT   DOMAIN          159..303
FT                   /note="Type IV secretion system coupling protein TraD DNA-
FT                   binding"
FT                   /evidence="ECO:0000259|Pfam:PF10412"
FT   DOMAIN          460..587
FT                   /note="TraD/TraG TraM recognition site"
FT                   /evidence="ECO:0000259|Pfam:PF12696"
SQ   SEQUENCE   609 AA;  68126 MW;  FEB504756408F8A1 CRC64;
     MNDRYEMPFR PNYEFMACMG WVAASSVAYL VNQVTDMPPE PVYWMSSICS IMAISRLPAA
     IRLHYVKRNL QGKKLEFITL EGLNKAIRKN PDQLWLGKGF YWENRHCQLV YEILKRNLSE
     IVNPRASKGI EGRDEMQMGA PWIHGLEPRE IVITQPIPHT EGHVLIKGTT GAGKTRLFDL
     VISQKALRGE AVLIIDPKGD KEMRENARRA AAFVERPFYS FHPAFPDECM RINPLQNFTR
     VTEIASRIAA LIPSETGSDP FKSFGWQALN NVCQGLYIID KRPTLKLLRR YLEGGVDSLV
     ISTVSAYARQ ALGEDWESMM VALFDKWLEP LPIRKKALMA SAFYKQVIQP VRASSELEGL
     LNMFEHDSAH FSKMVATLLP VLNMLTSGDL GPLLSPDPED PTDDRPITDS ALLINEGAIT
     YIGLDSLTDN MVASAIGSIL LSDLTAVAGD RYNFGVDNRP VNVFVDEAAE VINEPFIMLL
     NKGRGAKLTL YVATQTYADF CARLGSEHKA QQVLGNVNNT IALRLKDAET QEQFVKDIPE
     TRIKYVVRSQ NMNSGGEGPL LHGGGQGERL MEELVPLLDY QLLTMLPNLE YFAKLSGGKV
     IKGRIPILH
//