ID N9UTA4_9SPHN Unreviewed; 469 AA.
AC N9UTA4;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:ENY81544.1};
GN ORFNames=EBMC1_08476 {ECO:0000313|EMBL:ENY81544.1};
OS Sphingopyxis sp. MC1.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingopyxis.
OX NCBI_TaxID=1174684 {ECO:0000313|EMBL:ENY81544.1, ECO:0000313|Proteomes:UP000013072};
RN [1] {ECO:0000313|EMBL:ENY81544.1, ECO:0000313|Proteomes:UP000013072}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MC1 {ECO:0000313|EMBL:ENY81544.1,
RC ECO:0000313|Proteomes:UP000013072};
RA Lolas I.B., Kjeldal H., Almeida B., Le-Quy V., Gough H.L., Nielsen J.L.;
RT "Differential expression analysis of membrane associated proteins from
RT triclosan-degrading sphingopyxis.";
RL Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ENY81544.1}.
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DR EMBL; AOUN01000005; ENY81544.1; -; Genomic_DNA.
DR RefSeq; WP_003043640.1; NZ_AOUN01000005.1.
DR AlphaFoldDB; N9UTA4; -.
DR PATRIC; fig|1174684.3.peg.1711; -.
DR eggNOG; COG1396; Bacteria.
DR eggNOG; COG3800; Bacteria.
DR Proteomes; UP000013072; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR PANTHER; PTHR43236; ANTITOXIN HIGA1; 1.
DR PANTHER; PTHR43236:SF1; BLL7220 PROTEIN; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000013072};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 12..66
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 469 AA; 52177 MW; D3007ED4D132EDFA CRC64;
MTRQRIFAGA RLRQLRTERG IRQADFAERI GISTSYLSQI EHDDRPLTPA LLDRLQRLFP
LEWEEVAADA GDRRAGALRE AAADPLFAAA PLAPEQLERA ALQQPQLADQ FVALHAAYRR
AGQRLQIIDE AMTGGTAEGS RLPWEEVRDW FHDAGNYVDR LDRAAETLAG QLRGRDPSPA
IETIERRLRE ALGISIVYRQ HQVLRDFDAT MRHLIIDPSQ PAETRRFQLA HQLAALALAR
EIAAVIEASP LRTAAARQLL HVGLANYAAG AVLMPYAAFR ASARAVRHDI DRLRLDYGVS
FEQACHRLST LQRPGARGIP MFFCRVDMAG NITKRHSATR LQFARFGGAC PLWIVHEAAA
IPDRILFQLA ETPDGLRYVS MAKGLVKPSG SYARSPRRYA VALGCEAQYA ADFVYADGVD
VTAPHAATRI GSSCRICPRD DCDQRAFPPS DRPILVDPDR RDVVPYRIG
//
