ID N9WEU8_9SPHN Unreviewed; 733 AA.
AC N9WEU8;
DT 26-JUN-2013, integrated into UniProtKB/TrEMBL.
DT 26-JUN-2013, sequence version 1.
DT 24-JAN-2024, entry version 39.
DE RecName: Full=2-oxoglutarate dehydrogenase E1 component {ECO:0000256|ARBA:ARBA00013321};
DE AltName: Full=Alpha-ketoglutarate dehydrogenase {ECO:0000256|ARBA:ARBA00030680};
GN ORFNames=EBMC1_05044 {ECO:0000313|EMBL:ENY82228.1};
OS Sphingopyxis sp. MC1.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingopyxis.
OX NCBI_TaxID=1174684 {ECO:0000313|EMBL:ENY82228.1, ECO:0000313|Proteomes:UP000013072};
RN [1] {ECO:0000313|EMBL:ENY82228.1, ECO:0000313|Proteomes:UP000013072}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MC1 {ECO:0000313|EMBL:ENY82228.1,
RC ECO:0000313|Proteomes:UP000013072};
RA Lolas I.B., Kjeldal H., Almeida B., Le-Quy V., Gough H.L., Nielsen J.L.;
RT "Differential expression analysis of membrane associated proteins from
RT triclosan-degrading sphingopyxis.";
RL Submitted (FEB-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: E1 component of the 2-oxoglutarate dehydrogenase (OGDH)
CC complex which catalyzes the decarboxylation of 2-oxoglutarate, the
CC first step in the conversion of 2-oxoglutarate to succinyl-CoA and
CC CO(2). {ECO:0000256|ARBA:ARBA00003906}.
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC Evidence={ECO:0000256|ARBA:ARBA00001964};
CC -!- SUBUNIT: Homodimer. Part of the 2-oxoglutarate dehydrogenase (OGDH)
CC complex composed of E1 (2-oxoglutarate dehydrogenase), E2
CC (dihydrolipoamide succinyltransferase) and E3 (dihydrolipoamide
CC dehydrogenase); the complex contains multiple copies of the three
CC enzymatic components (E1, E2 and E3). {ECO:0000256|ARBA:ARBA00011301}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ENY82228.1}.
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DR EMBL; AOUN01000003; ENY82228.1; -; Genomic_DNA.
DR RefSeq; WP_003041588.1; NZ_AOUN01000003.1.
DR AlphaFoldDB; N9WEU8; -.
DR PATRIC; fig|1174684.3.peg.1013; -.
DR eggNOG; COG0022; Bacteria.
DR eggNOG; COG1071; Bacteria.
DR Proteomes; UP000013072; Unassembled WGS sequence.
DR GO; GO:0016624; F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor; IEA:InterPro.
DR Gene3D; 3.40.50.920; -; 1.
DR Gene3D; 3.40.50.970; -; 2.
DR InterPro; IPR001017; DH_E1.
DR InterPro; IPR029061; THDP-binding.
DR InterPro; IPR009014; Transketo_C/PFOR_II.
DR InterPro; IPR005475; Transketolase-like_Pyr-bd.
DR InterPro; IPR033248; Transketolase_C.
DR PANTHER; PTHR42980:SF1; 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA, MITOCHONDRIAL; 1.
DR PANTHER; PTHR42980; 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA-RELATED; 1.
DR Pfam; PF00676; E1_dh; 1.
DR Pfam; PF02779; Transket_pyr; 1.
DR Pfam; PF02780; Transketolase_C; 1.
DR SMART; SM00861; Transket_pyr; 1.
DR SUPFAM; SSF52518; Thiamin diphosphate-binding fold (THDP-binding); 2.
DR SUPFAM; SSF52922; TK C-terminal domain-like; 1.
PE 4: Predicted;
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Reference proteome {ECO:0000313|Proteomes:UP000013072}.
FT DOMAIN 398..579
FT /note="Transketolase-like pyrimidine-binding"
FT /evidence="ECO:0000259|SMART:SM00861"
SQ SEQUENCE 733 AA; 78427 MW; 71ED43C2261965AA CRC64;
MDAAQAVHEK FLGALASGTL ARRADAPDPA RAGLTRSDAT DIFLSQLTSR QMDRLSRTLQ
ARGEGFYTIG SSGHEGNAAV AAALRVTDMA FLHYRSNAFQ LHRARQLPGQ TPDWDMLLSF
AASAEDPISG GRHKVIGSKP LAIPPQTSTI ASHLPKAVGA AFSIGIARRL GMCGLPLPED
AVVLASFGDA SANHSTAQGA FNTAGWSAFQ GTPLPLIFLC EDNGIGISTR TPTGWIEAQF
RHRAGLHYIQ CDGTDLVAAY AGAKEAADFA RRTRKPVFLH MGTVRLYGHA GSDVQGAYLP
KALIEADEAR DPLLAGAALM VEQGWMSAAE VADAYEEIGA TLARQAEAAI RRPKLTTAAA
VMESLVPPKI DRPPANRPST DERAALFAGD ANQMDKPMHM ARLLSWALAD LMLAYPEIVV
AGEDVGPKGG VYNVTAKLHQ RFGSARVINT LLDEQAILGL AIGMAHNGFV PMPEIQFLAY
VHNAEDQIRG EAATLSFFSN GQYTNPMVIR IAGLGYQKGF GGHFHNDNSL AVFRDIPGVI
LAVPSNGRDA VQMLRECVRL AREEQRVVVF VEPIALYMTR DLHEEGDGLW TSAYEAPGEG
TPIRLGDVGV HGDGTDLAIV TYGNGTYLSR QAEKLLAADG VKARVIDLRW LGPVDADKLV
AAVGEAKRVL IVDECRITGS QSEALMALFT ERTPEKKLAR IAAEDSFIPL GKAATVTLPS
RDSIYAAAKE LLA
//