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Database: UniProt
Entry: O09242_9DELA
LinkDB: O09242_9DELA
Original site: O09242_9DELA 
ID   O09242_9DELA            Unreviewed;       993 AA.
AC   O09242;
DT   01-JUL-1997, integrated into UniProtKB/TrEMBL.
DT   01-JUL-1997, sequence version 1.
DT   24-JAN-2024, entry version 143.
DE   SubName: Full=Pol protein {ECO:0000313|EMBL:AAB58786.1};
DE   Flags: Fragment;
GN   Name=pol {ECO:0000313|EMBL:AAB58786.1};
OS   Simian T-lymphotropic virus 2.
OC   Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes;
OC   Ortervirales; Retroviridae; Orthoretrovirinae; Deltaretrovirus;
OC   Primate T-lymphotropic virus 2.
OX   NCBI_TaxID=33748 {ECO:0000313|EMBL:AAB58786.1};
RN   [1] {ECO:0000313|EMBL:AAB58786.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=9094642;
RA   Digilio L., Giri A., Cho N., Slattery J., Markham P., Franchini G.;
RT   "The simian T-lymphotropic/leukemia virus from Pan paniscus belongs to the
RT   type 2 family and infects Asian macaques.";
RL   J. Virol. 71:3684-3692(1997).
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DR   EMBL; U90557; AAB58786.1; -; Genomic_DNA.
DR   Proteomes; UP000130460; Genome.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR   GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:UniProtKB-KW.
DR   GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR   Gene3D; 3.30.70.270; -; 2.
DR   Gene3D; 2.40.70.10; Acid Proteases; 1.
DR   Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 2.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR   InterPro; IPR018061; Retropepsins.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR002156; RNaseH_domain.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR000477; RT_dom.
DR   PANTHER; PTHR41694; ENDOGENOUS RETROVIRUS GROUP K MEMBER POL PROTEIN; 1.
DR   PANTHER; PTHR41694:SF3; INTEGRASE-RELATED; 1.
DR   Pfam; PF00075; RNase_H; 1.
DR   Pfam; PF00665; rve; 1.
DR   Pfam; PF00077; RVP; 1.
DR   Pfam; PF00078; RVT_1; 1.
DR   SUPFAM; SSF50630; Acid proteases; 1.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
DR   PROSITE; PS50879; RNASE_H_1; 1.
DR   PROSITE; PS50878; RT_POL; 1.
PE   4: Predicted;
KW   DNA integration {ECO:0000256|ARBA:ARBA00022908};
KW   DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Multifunctional enzyme {ECO:0000256|ARBA:ARBA00023268};
KW   Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW   Reference proteome {ECO:0000313|Proteomes:UP000130460};
KW   RNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00022918};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679};
KW   Viral genome integration {ECO:0000256|ARBA:ARBA00023195};
KW   Virus entry into host cell {ECO:0000256|ARBA:ARBA00023195}.
FT   DOMAIN          144..334
FT                   /note="Reverse transcriptase"
FT                   /evidence="ECO:0000259|PROSITE:PS50878"
FT   DOMAIN          554..695
FT                   /note="RNase H type-1"
FT                   /evidence="ECO:0000259|PROSITE:PS50879"
FT   DOMAIN          751..909
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:AAB58786.1"
SQ   SEQUENCE   993 AA;  110519 MW;  3F1BE408967A04D2 CRC64;
     QGLISPSCPR PLPPSQKVSD TTVLGAGGQT SSQFKLLRSP LCVYLPFRKA PVTLPSCLLD
     TDNKWAIIGR DILQQCQSVL YLPEDNLCEG TPRPSGRMNS PRLLPVATPS VIGLEHFPPP
     PQIDQFPFKP ERLQALTDLV SKALEASYIE PYSGPGNNPV FPVKKPNGKW RFIHDLRATN
     AITTTLASPS PGPPDLTSLS TALPYVQTID LADAFFQIPL PKQFQPYFAF TIPQPCNYGP
     GARYAWTVLP QGFKNSPTLF EQQLAAILSP IRKAFPTSTI IQYMDDILLA SPAQGELQQL
     SKMTLQALVT HGLPVSQAPR EQTPGQIRFL GQVISPDHIT YETTPTIPMK SQWTLAELQT
     VLGEIQWVSK GTPILRKHLQ CLYSALRGYQ DPRAHLLLQK QQLHALHAIQ PLQHNCRSRL
     NPALPILGLI SLSSSGTTSV LFQARQRWPL VWLHTPHPPT SLGPWGHLLA CTILTLDKYS
     LQHYGRLCQS LEDNMSNTAL HDFVKNSPHP RVGILIHHMS RFHNLGSQPS GPWKALLHLP
     ALLQAARLLR PLFTLSPVVL TTHPVSSPTG LPKKAAYVLW DQTILRHDSI TLPPHGSNSA
     QRGELLALLS GLRAAKSWPS LNIFLDSKYL IKYLHSLATG AFLGTSTHQS LYAHLPALLH
     NKVIYLHHIR SHTNLPDPIS TLNEYTDSLI IIAPLIPLTP QDLHRLTHCN SRGPCFFRAT
     PQQSQVALES RVTPATSLNS QHHMPQGHIR RGLLPNHIWQ GDVTHYKYKR HRYCLHVWVD
     TFSNAVSITC KTKETSSETV SALLHAITIL GKPLSINTDN GSAFLSQEFQ AFCTSWHIRH
     STHVPYNPTS SGLVERTNGI VKALLNKYLL DSPNLPLDNA ISKSLWTLNQ LNVMSPSGKT
     RWQLHHGPRL PPSLQIPQPS KAPANWYYVL TPGLTNQRWK GPLHLSRKLQ ERLLSIDGSP
     QWIPWRLLKK TVCPRPDGSE LAAHAATDHQ HHG
//
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