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Database: UniProt
Entry: PP140_ARATH
LinkDB: PP140_ARATH
Original site: PP140_ARATH 
ID   PP140_ARATH             Reviewed;         584 AA.
AC   Q9ZVF4;
DT   16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT   01-MAY-1999, sequence version 1.
DT   24-JAN-2024, entry version 120.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At2g01510, mitochondrial;
DE   Flags: Precursor;
GN   Name=PCMP-H37; OrderedLocusNames=At2g01510; ORFNames=F2I9.13;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10617197; DOI=10.1038/45471;
RA   Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA   Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA   Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA   Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA   Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA   Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA   Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT   "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL   Nature 402:761-768(1999).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   GENE FAMILY.
RX   PubMed=10809006; DOI=10.1023/a:1006352315928;
RA   Aubourg S., Boudet N., Kreis M., Lecharny A.;
RT   "In Arabidopsis thaliana, 1% of the genome codes for a novel protein family
RT   unique to plants.";
RL   Plant Mol. Biol. 42:603-613(2000).
RN   [4]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AC005560; AAC67327.1; -; Genomic_DNA.
DR   EMBL; CP002685; AEC05463.1; -; Genomic_DNA.
DR   EMBL; CP002685; ANM62267.1; -; Genomic_DNA.
DR   PIR; F84425; F84425.
DR   RefSeq; NP_001324437.1; NM_001335067.1.
DR   RefSeq; NP_178260.1; NM_126212.2.
DR   AlphaFoldDB; Q9ZVF4; -.
DR   SMR; Q9ZVF4; -.
DR   STRING; 3702.Q9ZVF4; -.
DR   PaxDb; 3702-AT2G01510-1; -.
DR   ProteomicsDB; 249070; -.
DR   EnsemblPlants; AT2G01510.1; AT2G01510.1; AT2G01510.
DR   EnsemblPlants; AT2G01510.2; AT2G01510.2; AT2G01510.
DR   GeneID; 814680; -.
DR   Gramene; AT2G01510.1; AT2G01510.1; AT2G01510.
DR   Gramene; AT2G01510.2; AT2G01510.2; AT2G01510.
DR   KEGG; ath:AT2G01510; -.
DR   Araport; AT2G01510; -.
DR   TAIR; AT2G01510; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_15_10_1; -.
DR   InParanoid; Q9ZVF4; -.
DR   OMA; FDEMHKP; -.
DR   OrthoDB; 448912at2759; -.
DR   PhylomeDB; Q9ZVF4; -.
DR   PRO; PR:Q9ZVF4; -.
DR   Proteomes; UP000006548; Chromosome 2.
DR   ExpressionAtlas; Q9ZVF4; baseline and differential.
DR   Genevisible; Q9ZVF4; AT.
DR   GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR   InterPro; IPR032867; DYW_dom.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR046849; Eplus_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR046960; PPR_At4g14850-like_plant.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 2.
DR   PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR   Pfam; PF14432; DYW_deaminase; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF20430; Eplus_motif; 1.
DR   Pfam; PF01535; PPR; 3.
DR   Pfam; PF13041; PPR_2; 2.
DR   PROSITE; PS51375; PPR; 9.
PE   3: Inferred from homology;
KW   Mitochondrion; Reference proteome; Repeat; Transit peptide.
FT   TRANSIT         1..20
FT                   /note="Mitochondrion"
FT                   /evidence="ECO:0000255"
FT   CHAIN           21..584
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At2g01510, mitochondrial"
FT                   /id="PRO_0000356000"
FT   REPEAT          73..107
FT                   /note="PPR 1"
FT   REPEAT          108..142
FT                   /note="PPR 2"
FT   REPEAT          143..173
FT                   /note="PPR 3"
FT   REPEAT          174..208
FT                   /note="PPR 4"
FT   REPEAT          209..243
FT                   /note="PPR 5"
FT   REPEAT          244..274
FT                   /note="PPR 6"
FT   REPEAT          275..309
FT                   /note="PPR 7"
FT   REPEAT          310..344
FT                   /note="PPR 8"
FT   REPEAT          348..378
FT                   /note="PPR 9"
FT   REGION          383..458
FT                   /note="Type E motif"
FT   REGION          459..489
FT                   /note="Type E(+) motif"
FT   REGION          490..584
FT                   /note="Type DYW motif"
SQ   SEQUENCE   584 AA;  66072 MW;  2E9F6627D887EAA4 CRC64;
     MLAKQTPLTK QMLSELLRAS SSKPKQLKKI HAIVLRTGFS EKNSLLTQLL ENLVVIGDMC
     YARQVFDEMH KPRIFLWNTL FKGYVRNQLP FESLLLYKKM RDLGVRPDEF TYPFVVKAIS
     QLGDFSCGFA LHAHVVKYGF GCLGIVATEL VMMYMKFGEL SSAEFLFESM QVKDLVAWNA
     FLAVCVQTGN SAIALEYFNK MCADAVQFDS FTVVSMLSAC GQLGSLEIGE EIYDRARKEE
     IDCNIIVENA RLDMHLKCGN TEAARVLFEE MKQRNVVSWS TMIVGYAMNG DSREALTLFT
     TMQNEGLRPN YVTFLGVLSA CSHAGLVNEG KRYFSLMVQS NDKNLEPRKE HYACMVDLLG
     RSGLLEEAYE FIKKMPVEPD TGIWGALLGA CAVHRDMILG QKVADVLVET APDIGSYHVL
     LSNIYAAAGK WDCVDKVRSK MRKLGTKKVA AYSSVEFEGK IHFFNRGDKS HPQSKAIYEK
     LDEILKKIRK MGYVPDTCSV FHDVEMEEKE CSLSHHSEKL AIAFGLIKGR PGHPIRVMKN
     LRTCDDCHAF SKFVSSLTST EIIMRDKNRF HHFRNGVCSC KEFW
//
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