ID PP188_ARATH Reviewed; 501 AA.
AC Q9ZQA1;
DT 16-DEC-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-1999, sequence version 1.
DT 27-MAR-2024, entry version 115.
DE RecName: Full=Pentatricopeptide repeat-containing protein At2g36730;
GN Name=PCMP-E44; OrderedLocusNames=At2g36730; ORFNames=F13K3.13;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617197; DOI=10.1038/45471;
RA Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
RA Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
RA Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S.,
RA Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
RA Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
RA Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
RA Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
RT "Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.";
RL Nature 402:761-768(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=10809006; DOI=10.1023/a:1006352315928;
RA Aubourg S., Boudet N., Kreis M., Lecharny A.;
RT "In Arabidopsis thaliana, 1% of the genome codes for a novel protein family
RT unique to plants.";
RL Plant Mol. Biol. 42:603-613(2000).
RN [4]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-E subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
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DR EMBL; AC006282; AAD20149.1; -; Genomic_DNA.
DR EMBL; CP002685; AEC09292.1; -; Genomic_DNA.
DR PIR; A84784; A84784.
DR RefSeq; NP_181211.1; NM_129228.2.
DR AlphaFoldDB; Q9ZQA1; -.
DR SMR; Q9ZQA1; -.
DR STRING; 3702.Q9ZQA1; -.
DR PaxDb; 3702-AT2G36730-1; -.
DR ProteomicsDB; 250504; -.
DR EnsemblPlants; AT2G36730.1; AT2G36730.1; AT2G36730.
DR GeneID; 818245; -.
DR Gramene; AT2G36730.1; AT2G36730.1; AT2G36730.
DR KEGG; ath:AT2G36730; -.
DR Araport; AT2G36730; -.
DR TAIR; AT2G36730; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_0_6_1; -.
DR InParanoid; Q9ZQA1; -.
DR OMA; IGSWDEA; -.
DR OrthoDB; 470266at2759; -.
DR PhylomeDB; Q9ZQA1; -.
DR PRO; PR:Q9ZQA1; -.
DR Proteomes; UP000006548; Chromosome 2.
DR ExpressionAtlas; Q9ZQA1; baseline and differential.
DR Genevisible; Q9ZQA1; AT.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 2.
DR PANTHER; PTHR47928:SF190; OS04G0110500 PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 4.
DR Pfam; PF13041; PPR_2; 2.
DR PROSITE; PS51375; PPR; 8.
PE 3: Inferred from homology;
KW Reference proteome; Repeat.
FT CHAIN 1..501
FT /note="Pentatricopeptide repeat-containing protein
FT At2g36730"
FT /id="PRO_0000356047"
FT REPEAT 77..111
FT /note="PPR 1"
FT REPEAT 112..146
FT /note="PPR 2"
FT REPEAT 147..177
FT /note="PPR 3"
FT REPEAT 178..212
FT /note="PPR 4"
FT REPEAT 213..243
FT /note="PPR 5"
FT REPEAT 246..276
FT /note="PPR 6"
FT REPEAT 277..312
FT /note="PPR 7"
FT REPEAT 313..343
FT /note="PPR 8"
FT REPEAT 349..379
FT /note="PPR 9"
FT REGION 384..462
FT /note="Type E motif"
FT REGION 463..493
FT /note="Type E(+) motif"
SQ SEQUENCE 501 AA; 56951 MW; C0A52631698E1EB7 CRC64;
MIWSSDSCFK SRKHQCLIFL KLCSSIKHLL QIHGQIHLSS LQNDSFIISE LVRVSSLSLA
KDLAFARTLL LHSSDSTPST WNMLSRGYSS SDSPVESIWV YSEMKRRGIK PNKLTFPFLL
KACASFLGLT AGRQIQVEVL KHGFDFDVYV GNNLIHLYGT CKKTSDARKV FDEMTERNVV
SWNSIMTALV ENGKLNLVFE CFCEMIGKRF CPDETTMVVL LSACGGNLSL GKLVHSQVMV
RELELNCRLG TALVDMYAKS GGLEYARLVF ERMVDKNVWT WSAMIVGLAQ YGFAEEALQL
FSKMMKESSV RPNYVTFLGV LCACSHTGLV DDGYKYFHEM EKIHKIKPMM IHYGAMVDIL
GRAGRLNEAY DFIKKMPFEP DAVVWRTLLS ACSIHHDEDD EGIGEKVKKR LIELEPKRSG
NLVIVANRFA EARMWAEAAE VRRVMKETKM KKIAGESCLE LGGSFHRFFS GYDPRSEYVS
IYELLDLFKF QLTCDYRLVS E
//
