ID PP418_ARATH Reviewed; 472 AA.
AC Q9FNL2;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 27-MAR-2024, entry version 109.
DE RecName: Full=Pentatricopeptide repeat-containing protein At5g46100;
GN OrderedLocusNames=At5g46100; ORFNames=MCL19.15;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9405937; DOI=10.1093/dnares/4.4.291;
RA Kotani H., Nakamura Y., Sato S., Kaneko T., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. II. Sequence
RT features of the regions of 1,044,062 bp covered by thirteen physically
RT assigned P1 clones.";
RL DNA Res. 4:291-300(1997).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA Taconnat L., Small I.;
RT "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT reveals their essential role in organelle biogenesis.";
RL Plant Cell 16:2089-2103(2004).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC URL="https://ppr.plantenergy.uwa.edu.au";
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AB006698; BAB08255.1; -; Genomic_DNA.
DR EMBL; CP002688; AED95337.1; -; Genomic_DNA.
DR RefSeq; NP_199422.1; NM_123978.2.
DR AlphaFoldDB; Q9FNL2; -.
DR SMR; Q9FNL2; -.
DR PaxDb; 3702-AT5G46100-1; -.
DR ProteomicsDB; 249299; -.
DR EnsemblPlants; AT5G46100.1; AT5G46100.1; AT5G46100.
DR GeneID; 834651; -.
DR Gramene; AT5G46100.1; AT5G46100.1; AT5G46100.
DR KEGG; ath:AT5G46100; -.
DR Araport; AT5G46100; -.
DR TAIR; AT5G46100; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_0_1; -.
DR InParanoid; Q9FNL2; -.
DR OMA; EMPNRGC; -.
DR OrthoDB; 2056457at2759; -.
DR PhylomeDB; Q9FNL2; -.
DR PRO; PR:Q9FNL2; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FNL2; baseline and differential.
DR Genevisible; Q9FNL2; AT.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR47938:SF2; OS06G0184866 PROTEIN; 1.
DR PANTHER; PTHR47938; RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 11.
PE 2: Evidence at transcript level;
KW Reference proteome; Repeat.
FT CHAIN 1..472
FT /note="Pentatricopeptide repeat-containing protein
FT At5g46100"
FT /id="PRO_0000363555"
FT REPEAT 50..84
FT /note="PPR 1"
FT REPEAT 85..119
FT /note="PPR 2"
FT REPEAT 120..154
FT /note="PPR 3"
FT REPEAT 155..190
FT /note="PPR 4"
FT REPEAT 191..225
FT /note="PPR 5"
FT REPEAT 226..260
FT /note="PPR 6"
FT REPEAT 261..295
FT /note="PPR 7"
FT REPEAT 296..330
FT /note="PPR 8"
FT REPEAT 331..365
FT /note="PPR 9"
FT REPEAT 373..406
FT /note="PPR 10"
FT REPEAT 407..441
FT /note="PPR 11"
SQ SEQUENCE 472 AA; 52879 MW; 7F5B154DAAE928A8 CRC64;
MGSKVMMFKW SKNITPSQVI KLMRAEKDVE KSMAVFDSAT AEYANGYVHD QSSFGYMVLR
LVSANKFKAA EDLIVRMKIE NCVVSEDILL SICRGYGRVH RPFDSLRVFH KMKDFDCDPS
QKAYVTVLAI LVEENQLNLA FKFYKNMREI GLPPTVASLN VLIKALCRND GTVDAGLKIF
LEMPKRGCDP DSYTYGTLIS GLCRFGRIDE AKKLFTEMVE KDCAPTVVTY TSLINGLCGS
KNVDEAMRYL EEMKSKGIEP NVFTYSSLMD GLCKDGRSLQ AMELFEMMMA RGCRPNMVTY
TTLITGLCKE QKIQEAVELL DRMNLQGLKP DAGLYGKVIS GFCAISKFRE AANFLDEMIL
GGITPNRLTW NIHVKTSNEV VRGLCANYPS RAFTLYLSMR SRGISVEVET LESLVKCLCK
KGEFQKAVQL VDEIVTDGCI PSKGTWKLLI GHTLDKTIVG EASDTLLRDL DI
//
