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Database: UniProt
Entry: PP445_ARATH
LinkDB: PP445_ARATH
Original site: PP445_ARATH 
ID   PP445_ARATH             Reviewed;         915 AA.
AC   Q9LSL9;
DT   10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   27-MAR-2024, entry version 115.
DE   RecName: Full=Pentatricopeptide repeat-containing protein At5g65560;
GN   OrderedLocusNames=At5g65560; ORFNames=K21L13.7;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RA   Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA   Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL   Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA   Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA   Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA   Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA   Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL   Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   GENE FAMILY.
RX   PubMed=15269332; DOI=10.1105/tpc.104.022236;
RA   Lurin C., Andres C., Aubourg S., Bellaoui M., Bitton F., Bruyere C.,
RA   Caboche M., Debast C., Gualberto J., Hoffmann B., Lecharny A., Le Ret M.,
RA   Martin-Magniette M.-L., Mireau H., Peeters N., Renou J.-P., Szurek B.,
RA   Taconnat L., Small I.;
RT   "Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins
RT   reveals their essential role in organelle biogenesis.";
RL   Plant Cell 16:2089-2103(2004).
CC   -!- SIMILARITY: Belongs to the PPR family. P subfamily. {ECO:0000305}.
CC   -!- WEB RESOURCE: Name=Pentatricopeptide repeat proteins;
CC       URL="https://ppr.plantenergy.uwa.edu.au";
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DR   EMBL; AB026639; BAA98175.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED98071.1; -; Genomic_DNA.
DR   EMBL; CP002688; ANM70230.1; -; Genomic_DNA.
DR   EMBL; CP002688; ANM70231.1; -; Genomic_DNA.
DR   EMBL; AK228697; BAF00601.1; -; mRNA.
DR   RefSeq; NP_001331859.1; NM_001345697.1.
DR   RefSeq; NP_001331860.1; NM_001345698.1.
DR   RefSeq; NP_201359.1; NM_125954.6.
DR   AlphaFoldDB; Q9LSL9; -.
DR   SMR; Q9LSL9; -.
DR   PaxDb; 3702-AT5G65560-1; -.
DR   ProteomicsDB; 249326; -.
DR   EnsemblPlants; AT5G65560.1; AT5G65560.1; AT5G65560.
DR   EnsemblPlants; AT5G65560.2; AT5G65560.2; AT5G65560.
DR   EnsemblPlants; AT5G65560.3; AT5G65560.3; AT5G65560.
DR   GeneID; 836682; -.
DR   Gramene; AT5G65560.1; AT5G65560.1; AT5G65560.
DR   Gramene; AT5G65560.2; AT5G65560.2; AT5G65560.
DR   Gramene; AT5G65560.3; AT5G65560.3; AT5G65560.
DR   KEGG; ath:AT5G65560; -.
DR   Araport; AT5G65560; -.
DR   TAIR; AT5G65560; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_002706_49_3_1; -.
DR   InParanoid; Q9LSL9; -.
DR   OMA; EPETFTC; -.
DR   OrthoDB; 446379at2759; -.
DR   PhylomeDB; Q9LSL9; -.
DR   PRO; PR:Q9LSL9; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q9LSL9; baseline and differential.
DR   Genevisible; Q9LSL9; AT.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 9.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 17.
DR   PANTHER; PTHR47934; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL; 1.
DR   PANTHER; PTHR47934:SF6; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL-RELATED; 1.
DR   Pfam; PF01535; PPR; 2.
DR   Pfam; PF12854; PPR_1; 1.
DR   Pfam; PF13041; PPR_2; 7.
DR   Pfam; PF13812; PPR_3; 1.
DR   SUPFAM; SSF81901; HCP-like; 1.
DR   PROSITE; PS51375; PPR; 20.
PE   2: Evidence at transcript level;
KW   Reference proteome; Repeat.
FT   CHAIN           1..915
FT                   /note="Pentatricopeptide repeat-containing protein
FT                   At5g65560"
FT                   /id="PRO_0000363582"
FT   REPEAT          182..216
FT                   /note="PPR 1"
FT   REPEAT          217..251
FT                   /note="PPR 2"
FT   REPEAT          252..286
FT                   /note="PPR 3"
FT   REPEAT          287..321
FT                   /note="PPR 4"
FT   REPEAT          322..356
FT                   /note="PPR 5"
FT   REPEAT          357..391
FT                   /note="PPR 6"
FT   REPEAT          392..426
FT                   /note="PPR 7"
FT   REPEAT          427..460
FT                   /note="PPR 8"
FT   REPEAT          461..495
FT                   /note="PPR 9"
FT   REPEAT          496..530
FT                   /note="PPR 10"
FT   REPEAT          531..565
FT                   /note="PPR 11"
FT   REPEAT          566..600
FT                   /note="PPR 12"
FT   REPEAT          601..635
FT                   /note="PPR 13"
FT   REPEAT          636..670
FT                   /note="PPR 14"
FT   REPEAT          671..705
FT                   /note="PPR 15"
FT   REPEAT          724..758
FT                   /note="PPR 16"
FT   REPEAT          759..794
FT                   /note="PPR 17"
FT   REPEAT          795..829
FT                   /note="PPR 18"
FT   REPEAT          830..864
FT                   /note="PPR 19"
FT   REPEAT          865..899
FT                   /note="PPR 20"
SQ   SEQUENCE   915 AA;  103538 MW;  CD5AD7AF18684E48 CRC64;
     MIRRIQPRCN SGLTGSVSAF EVLKKKFSTD VTVPSPVTRR QFCSVSPLLR NLPEEESDSM
     SVPHRLLSIL SKPNWHKSPS LKSMVSAISP SHVSSLFSLD LDPKTALNFS HWISQNPRYK
     HSVYSYASLL TLLINNGYVG VVFKIRLLMI KSCDSVGDAL YVLDLCRKMN KDERFELKYK
     LIIGCYNTLL NSLARFGLVD EMKQVYMEML EDKVCPNIYT YNKMVNGYCK LGNVEEANQY
     VSKIVEAGLD PDFFTYTSLI MGYCQRKDLD SAFKVFNEMP LKGCRRNEVA YTHLIHGLCV
     ARRIDEAMDL FVKMKDDECF PTVRTYTVLI KSLCGSERKS EALNLVKEME ETGIKPNIHT
     YTVLIDSLCS QCKFEKAREL LGQMLEKGLM PNVITYNALI NGYCKRGMIE DAVDVVELME
     SRKLSPNTRT YNELIKGYCK SNVHKAMGVL NKMLERKVLP DVVTYNSLID GQCRSGNFDS
     AYRLLSLMND RGLVPDQWTY TSMIDSLCKS KRVEEACDLF DSLEQKGVNP NVVMYTALID
     GYCKAGKVDE AHLMLEKMLS KNCLPNSLTF NALIHGLCAD GKLKEATLLE EKMVKIGLQP
     TVSTDTILIH RLLKDGDFDH AYSRFQQMLS SGTKPDAHTY TTFIQTYCRE GRLLDAEDMM
     AKMRENGVSP DLFTYSSLIK GYGDLGQTNF AFDVLKRMRD TGCEPSQHTF LSLIKHLLEM
     KYGKQKGSEP ELCAMSNMME FDTVVELLEK MVEHSVTPNA KSYEKLILGI CEVGNLRVAE
     KVFDHMQRNE GISPSELVFN ALLSCCCKLK KHNEAAKVVD DMICVGHLPQ LESCKVLICG
     LYKKGEKERG TSVFQNLLQC GYYEDELAWK IIIDGVGKQG LVEAFYELFN VMEKNGCKFS
     SQTYSLLIEG PPDST
//
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