ID Q03CG3_LACP3 Unreviewed; 599 AA.
AC Q03CG3;
DT 14-NOV-2006, integrated into UniProtKB/TrEMBL.
DT 14-NOV-2006, sequence version 1.
DT 27-MAR-2024, entry version 93.
DE RecName: Full=Oligoendopeptidase F {ECO:0000256|RuleBase:RU368091};
DE EC=3.4.24.- {ECO:0000256|RuleBase:RU368091};
GN OrderedLocusNames=LSEI_0246 {ECO:0000313|EMBL:ABJ69109.1};
OS Lacticaseibacillus paracasei (strain ATCC 334 / BCRC 17002 / CCUG 31169 /
OS CIP 107868 / KCTC 3260 / NRRL B-441) (Lactobacillus paracasei).
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Lacticaseibacillus.
OX NCBI_TaxID=321967 {ECO:0000313|EMBL:ABJ69109.1, ECO:0000313|Proteomes:UP000001651};
RN [1] {ECO:0000313|EMBL:ABJ69109.1, ECO:0000313|Proteomes:UP000001651}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 334 / BCRC 17002 / CCUG 31169 / CIP 107868 / KCTC 3260 /
RC NRRL B-441 {ECO:0000313|Proteomes:UP000001651};
RX PubMed=17030793; DOI=10.1073/pnas.0607117103;
RA Makarova K., Slesarev A., Wolf Y., Sorokin A., Mirkin B., Koonin E.,
RA Pavlov A., Pavlova N., Karamychev V., Polouchine N., Shakhova V.,
RA Grigoriev I., Lou Y., Rohksar D., Lucas S., Huang K., Goodstein D.M.,
RA Hawkins T., Plengvidhya V., Welker D., Hughes J., Goh Y., Benson A.,
RA Baldwin K., Lee J.H., Diaz-Muniz I., Dosti B., Smeianov V., Wechter W.,
RA Barabote R., Lorca G., Altermann E., Barrangou R., Ganesan B., Xie Y.,
RA Rawsthorne H., Tamir D., Parker C., Breidt F., Broadbent J., Hutkins R.,
RA O'Sullivan D., Steele J., Unlu G., Saier M., Klaenhammer T., Richardson P.,
RA Kozyavkin S., Weimer B., Mills D.;
RT "Comparative genomics of the lactic acid bacteria.";
RL Proc. Natl. Acad. Sci. U.S.A. 103:15611-15616(2006).
CC -!- FUNCTION: Has oligopeptidase activity and degrades a variety of small
CC bioactive peptides. {ECO:0000256|RuleBase:RU368091}.
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|RuleBase:RU368091};
CC Note=Binds 1 zinc ion. {ECO:0000256|RuleBase:RU368091};
CC -!- SIMILARITY: Belongs to the peptidase M3B family.
CC {ECO:0000256|RuleBase:RU368091}.
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DR EMBL; CP000423; ABJ69109.1; -; Genomic_DNA.
DR RefSeq; WP_003577415.1; NC_008526.1.
DR RefSeq; YP_805551.1; NC_008526.1.
DR AlphaFoldDB; Q03CG3; -.
DR STRING; 321967.LSEI_0246; -.
DR MEROPS; M03.007; -.
DR PaxDb; 321967-LSEI_0246; -.
DR KEGG; lca:LSEI_0246; -.
DR PATRIC; fig|321967.11.peg.272; -.
DR HOGENOM; CLU_021290_2_0_9; -.
DR Proteomes; UP000001651; Chromosome.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004222; F:metalloendopeptidase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR CDD; cd09608; M3B_PepF; 1.
DR Gene3D; 1.10.1370.20; Oligoendopeptidase f, C-terminal domain; 1.
DR Gene3D; 1.20.140.70; Oligopeptidase f, N-terminal domain; 1.
DR Gene3D; 1.10.287.830; putative peptidase helix hairpin domain like; 1.
DR InterPro; IPR013647; OligopepF_N_dom.
DR InterPro; IPR042088; OligoPept_F_C.
DR InterPro; IPR045090; Pept_M3A_M3B.
DR InterPro; IPR001567; Pept_M3A_M3B_dom.
DR InterPro; IPR004438; Peptidase_M3B.
DR NCBIfam; TIGR00181; pepF; 1.
DR PANTHER; PTHR11804:SF79; MITOCHONDRIAL INTERMEDIATE PEPTIDASE; 1.
DR PANTHER; PTHR11804; PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED; 1.
DR Pfam; PF01432; Peptidase_M3; 1.
DR Pfam; PF08439; Peptidase_M3_N; 1.
DR SUPFAM; SSF55486; Metalloproteases ('zincins'), catalytic domain; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU368091};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723,
KW ECO:0000256|RuleBase:RU368091};
KW Metalloprotease {ECO:0000256|ARBA:ARBA00023049,
KW ECO:0000256|RuleBase:RU368091};
KW Protease {ECO:0000256|ARBA:ARBA00022670, ECO:0000256|RuleBase:RU368091};
KW Reference proteome {ECO:0000313|Proteomes:UP000001651};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|RuleBase:RU368091}.
FT DOMAIN 114..182
FT /note="Oligopeptidase F N-terminal"
FT /evidence="ECO:0000259|Pfam:PF08439"
FT DOMAIN 203..583
FT /note="Peptidase M3A/M3B catalytic"
FT /evidence="ECO:0000259|Pfam:PF01432"
SQ SEQUENCE 599 AA; 67252 MW; CE62A61404334A55 CRC64;
MQHLPARAEV PTELTWDLTT IYPDDKAWQV DFEAVRQQAK EAAALKGTLG KSPEALVAGI
KAVLAVFRRF EKVYVYSSLK SDQDTGNAAY QAMNAKAESL AADLASQLAF MDPEILAIPA
DQLTAWRDTE SLKPYGHFID AITVNRQHVL TTAAESLIAS AGDALNASHA TFNVLNNSDL
QFGFVENEDG ETVQLSNGLY GQLIRSTNRK LRKDAFEALL RAYESLKNTF AQTLSGQIKA
HNFNALAHHY PDARAAAMAS NHIPESVYTT LLDQVNAHLP LLHRYIALRK KILNVDQLHM
YDIYTPLTGR PPLSFTLDQA KDEALKALAP LGNDYLDHMR EIFNNRYIDV VENKGKRSGA
YSGGAYDTNP FILLNWHDAV DELYTLVHET GHSVHSWYTR HHQPYVYGDY PIFVAEIAST
TNENLLTDYF LKNTNDPKVR AYILNYYLDG FKGTVFRQAQ FADFEHWIHQ QDQHGEPLTA
TSMSSYYADL NARYYGPDVA RDPEIAFEWA RIPHFYYNYY VYQYATGFAA ASTLAAGISG
GEPEAVSRYI GYLKSGSSKY AIDTMKAAGV DMTKPDYLEA AFSLFEQRLA ELEEILQKG
//