ID Q07GD2_ROSDO Unreviewed; 469 AA.
AC Q07GD2;
DT 31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2006, sequence version 1.
DT 24-JAN-2024, entry version 68.
DE SubName: Full=VirD4 protein, putative {ECO:0000313|EMBL:ABI93467.1};
GN Name=virD {ECO:0000313|EMBL:ABI93467.1};
GN OrderedLocusNames=RD1_C0002 {ECO:0000313|EMBL:ABI93467.1};
OS Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp.
OS (strain OCh 114)) (Roseobacter denitrificans).
OG Plasmid pTB3 {ECO:0000313|EMBL:ABI93467.1,
OG ECO:0000313|Proteomes:UP000007029}.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Roseobacter.
OX NCBI_TaxID=375451 {ECO:0000313|EMBL:ABI93467.1, ECO:0000313|Proteomes:UP000007029};
RN [1] {ECO:0000313|EMBL:ABI93467.1, ECO:0000313|Proteomes:UP000007029}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33942 / OCh 114 {ECO:0000313|Proteomes:UP000007029};
RC PLASMID=pTB3 {ECO:0000313|EMBL:ABI93467.1,
RC ECO:0000313|Proteomes:UP000007029};
RX PubMed=17098896; DOI=10.1128/JB.01390-06;
RA Swingley W.D., Sadekar S., Mastrian S.D., Matthies H.J., Hao J., Ramos H.,
RA Acharya C.R., Conrad A.L., Taylor H.L., Dejesa L.C., Shah M.K.,
RA O'huallachain M.E., Lince M.T., Blankenship R.E., Beatty J.T.,
RA Touchman J.W.;
RT "The complete genome sequence of Roseobacter denitrificans reveals a
RT mixotrophic rather than photosynthetic metabolism.";
RL J. Bacteriol. 189:683-690(2007).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the VirD4/TraG family.
CC {ECO:0000256|ARBA:ARBA00008806}.
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DR EMBL; CP000466; ABI93467.1; -; Genomic_DNA.
DR AlphaFoldDB; Q07GD2; -.
DR KEGG; rde:RD1_C0002; -.
DR HOGENOM; CLU_012039_3_0_5; -.
DR Proteomes; UP000007029; Plasmid pTB3.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR CDD; cd01127; TrwB_TraG_TraD_VirD4; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR003688; TraG/VirD4.
DR PANTHER; PTHR37937; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR PANTHER; PTHR37937:SF1; CONJUGATIVE TRANSFER: DNA TRANSPORT; 1.
DR Pfam; PF02534; T4SS-DNA_transf; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW Plasmid {ECO:0000313|EMBL:ABI93467.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000007029}.
SQ SEQUENCE 469 AA; 51527 MW; CFF6D3094F269F82 CRC64;
MASGADAYFG LTGDSHGSAR FANRKELKKL QRQDGLLIGR NPHTGRLLHY DGPAHLITLA
PTRAGKGVGT VIPNLLAAER SVLVIDPKGE NARIAGEARR RFGTVYVLDP FEVSGHPSAA
YNPLDRLTPD SLDLGEDAAS LTEALVMDPP GQVTEAHWNE EAKAILGGLI MFCVCHEDRD
RRSLATVREY LTLPPEKLRA LLELMQDSDE AGGLIARAAN RFLGKADREA ASVLSNAQRH
THFLDSPRIA RCLARSDFAF SDLRHRITSV FLVLPPNRMD AYSRWLRLLV SQALQDVARD
AERPQGASDG HSQRLKTPAL FMLDEFAALG RLEAVERAMG LMAGYGLQLW PILQDMSQLK
DLYGDRANTF IANAGVQQVF GVNDFETAKW LSQMIGQETA GFQTDSFKPG DGPSFSNNLT
GRDLLTPDEI MQLPPDRQLL RVQGQATAVA QKLRYFADPE FAGLFTPEA
//
