ID Q07J38_RHOP5 Unreviewed; 256 AA.
AC Q07J38;
DT 31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2006, sequence version 1.
DT 27-MAR-2024, entry version 90.
DE SubName: Full=Transcriptional regulator, IclR family {ECO:0000313|EMBL:ABJ08046.1};
GN OrderedLocusNames=RPE_4120 {ECO:0000313|EMBL:ABJ08046.1};
OS Rhodopseudomonas palustris (strain BisA53).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Rhodopseudomonas.
OX NCBI_TaxID=316055 {ECO:0000313|EMBL:ABJ08046.1};
RN [1] {ECO:0000313|EMBL:ABJ08046.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BisA53 {ECO:0000313|EMBL:ABJ08046.1};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA Hauser L., Pelletier D.A., Kyrpides N., Kim E., Harwood C.S., Oda Y.,
RA Richardson P.;
RT "Complete sequence of Rhodopseudomonas palustris BisA53.";
RL Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP000463; ABJ08046.1; -; Genomic_DNA.
DR AlphaFoldDB; Q07J38; -.
DR STRING; 316055.RPE_4120; -.
DR KEGG; rpe:RPE_4120; -.
DR eggNOG; COG1414; Bacteria.
DR HOGENOM; CLU_062618_0_1_5; -.
DR OrthoDB; 9807558at2; -.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR014757; Tscrpt_reg_IclR_C.
DR InterPro; IPR005471; Tscrpt_reg_IclR_N.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30136; HELIX-TURN-HELIX TRANSCRIPTIONAL REGULATOR, ICLR FAMILY; 1.
DR PANTHER; PTHR30136:SF34; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF09339; HTH_IclR; 1.
DR Pfam; PF01614; IclR; 1.
DR SMART; SM00346; HTH_ICLR; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51077; HTH_ICLR; 1.
DR PROSITE; PS51078; ICLR_ED; 1.
PE 4: Predicted;
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 9..69
FT /note="HTH iclR-type"
FT /evidence="ECO:0000259|PROSITE:PS51077"
FT DOMAIN 70..254
FT /note="IclR-ED"
FT /evidence="ECO:0000259|PROSITE:PS51078"
SQ SEQUENCE 256 AA; 27633 MW; CF102C48AEF3FAE0 CRC64;
MAKESDGFVR AIARGFSIVE ALGRPPGRHT LSEAAIASGL NRATARRMLA TLVALNYCEV
EGRYFSLRPR ALGLGLSYLN ALPYWGYAQS ALEDLRNEIG ESCALAVLDE TEIVYALRLP
ARRILSANLG IGSRLPAHVV SLGRVLLASL PPEKLNYFLA NAALQKLTPR TVVEPDKLAA
ELQRTREQGY AWIDGELDPA ICGIAVPVRD HRGAVVAAVS INTISGSIDE ETAKERFLTA
LRRTAQNIQS QTAAAA
//
