ID Q07X70_SHEFN Unreviewed; 424 AA.
AC Q07X70;
DT 31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2006, sequence version 1.
DT 27-MAR-2024, entry version 76.
DE RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
DE Flags: Precursor;
GN OrderedLocusNames=Sfri_3567 {ECO:0000313|EMBL:ABI73394.1};
OS Shewanella frigidimarina (strain NCIMB 400).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=318167 {ECO:0000313|EMBL:ABI73394.1, ECO:0000313|Proteomes:UP000000684};
RN [1] {ECO:0000313|EMBL:ABI73394.1, ECO:0000313|Proteomes:UP000000684}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCIMB 400 {ECO:0000313|EMBL:ABI73394.1,
RC ECO:0000313|Proteomes:UP000000684};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T., Nealson K.H.,
RA Newman D., Tiedje J.M., Zhou J., Romine M.F., Culley D.E., Serres M.,
RA Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.;
RT "Complete sequence of Shewanella frigidimarina NCIMB 400.";
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC ChEBI:CHEBI:83408; EC=3.1.4.46;
CC Evidence={ECO:0000256|ARBA:ARBA00029315};
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DR EMBL; CP000447; ABI73394.1; -; Genomic_DNA.
DR RefSeq; WP_011638984.1; NC_008345.1.
DR AlphaFoldDB; Q07X70; -.
DR STRING; 318167.Sfri_3567; -.
DR KEGG; sfr:Sfri_3567; -.
DR eggNOG; COG0584; Bacteria.
DR HOGENOM; CLU_036449_0_0_6; -.
DR OrthoDB; 9795622at2; -.
DR Proteomes; UP000000684; Chromosome.
DR GO; GO:0008081; F:phosphoric diester hydrolase activity; IEA:InterPro.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR CDD; cd08560; GDPD_EcGlpQ_like_1; 1.
DR Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 1.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR PANTHER; PTHR43620:SF7; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD6; 1.
DR PANTHER; PTHR43620; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR Pfam; PF03009; GDPD; 1.
DR SUPFAM; SSF51695; PLC-like phosphodiesterases; 1.
DR PROSITE; PS51704; GP_PDE; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000000684};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..26
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 27..424
FT /note="glycerophosphodiester phosphodiesterase"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004166186"
FT DOMAIN 76..419
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
SQ SEQUENCE 424 AA; 45640 MW; 19FAC488C2BB7CAC CRC64;
MTRKKSVTLG IISVLTSMLW ISGCNSNDNN DTTAEVDKSV SAQVGPRPLF LVGQMQDSEL
KDQLAQCASN SFYRTDFSIG HRGASMQFPE HTKEAYQAAI DSGAGIVECD VTFTADKELV
CRHSQCDLAT TTNILAIPAL ANKCSVPFSP ADAVNGVSAT ATCCTSDISL AEFTTLKGKM
DGFNPNATTV EEFMDGTPNW RTDLYAGNGT LMTHAESIAL FKAAGVKMTP ELKSASISMP
YDGFTQQDYA QKMLDEYAAA GVDASQVFPQ SFNLDDVKYW IANAPEFADQ AVYLDDRYDL
SGFDPQNSAT WSPSMDTLAA DGVKIIAPPL WMLVTVGDNN AIVPSEYAKA ASAAGLKMIA
WSLERSGPLS QGGGGWYYQS IADVIDNEGD TFELLDVLAK DVGVMGVFSD WPATVTYYAN
CMNM
//
