ID Q085D4_SHEFN Unreviewed; 827 AA.
AC Q085D4;
DT 31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2006, sequence version 1.
DT 24-JAN-2024, entry version 100.
DE RecName: Full=Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430};
DE Flags: Precursor;
GN Name=bamA {ECO:0000256|HAMAP-Rule:MF_01430};
GN OrderedLocusNames=Sfri_1278 {ECO:0000313|EMBL:ABI71131.1};
OS Shewanella frigidimarina (strain NCIMB 400).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=318167 {ECO:0000313|EMBL:ABI71131.1, ECO:0000313|Proteomes:UP000000684};
RN [1] {ECO:0000313|EMBL:ABI71131.1, ECO:0000313|Proteomes:UP000000684}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCIMB 400 {ECO:0000313|EMBL:ABI71131.1,
RC ECO:0000313|Proteomes:UP000000684};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T., Nealson K.H.,
RA Newman D., Tiedje J.M., Zhou J., Romine M.F., Culley D.E., Serres M.,
RA Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.;
RT "Complete sequence of Shewanella frigidimarina NCIMB 400.";
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Part of the outer membrane protein assembly complex, which is
CC involved in assembly and insertion of beta-barrel proteins into the
CC outer membrane. {ECO:0000256|HAMAP-Rule:MF_01430}.
CC -!- SUBUNIT: Part of the Bam complex. {ECO:0000256|HAMAP-Rule:MF_01430}.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000256|HAMAP-
CC Rule:MF_01430}. Membrane {ECO:0000256|ARBA:ARBA00004370}.
CC -!- SIMILARITY: Belongs to the BamA family. {ECO:0000256|HAMAP-
CC Rule:MF_01430}.
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DR EMBL; CP000447; ABI71131.1; -; Genomic_DNA.
DR RefSeq; WP_011636752.1; NC_008345.1.
DR AlphaFoldDB; Q085D4; -.
DR STRING; 318167.Sfri_1278; -.
DR KEGG; sfr:Sfri_1278; -.
DR eggNOG; COG4775; Bacteria.
DR HOGENOM; CLU_007664_1_0_6; -.
DR OMA; IFMPAFG; -.
DR OrthoDB; 9803054at2; -.
DR Proteomes; UP000000684; Chromosome.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR GO; GO:0051205; P:protein insertion into membrane; IEA:UniProtKB-UniRule.
DR Gene3D; 3.10.20.310; membrane protein fhac; 5.
DR Gene3D; 2.40.160.50; membrane protein fhac: a member of the omp85/tpsb transporter family; 1.
DR HAMAP; MF_01430; OM_assembly_BamA; 1.
DR InterPro; IPR000184; Bac_surfAg_D15.
DR InterPro; IPR010827; BamA/TamA_POTRA.
DR InterPro; IPR039910; D15-like.
DR InterPro; IPR023707; OM_assembly_BamA.
DR InterPro; IPR034746; POTRA.
DR NCBIfam; TIGR03303; OM_YaeT; 1.
DR PANTHER; PTHR12815:SF23; OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMA; 1.
DR PANTHER; PTHR12815; SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER; 1.
DR Pfam; PF01103; Omp85; 1.
DR Pfam; PF07244; POTRA; 4.
DR PIRSF; PIRSF006076; OM_assembly_OMP85; 1.
DR PROSITE; PS51779; POTRA; 5.
PE 3: Inferred from homology;
KW Cell outer membrane {ECO:0000256|HAMAP-Rule:MF_01430};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|HAMAP-Rule:MF_01430};
KW Reference proteome {ECO:0000313|Proteomes:UP000000684};
KW Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|HAMAP-Rule:MF_01430};
KW Signal {ECO:0000256|HAMAP-Rule:MF_01430};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|HAMAP-
KW Rule:MF_01430};
KW Transmembrane beta strand {ECO:0000256|ARBA:ARBA00022452,
KW ECO:0000256|HAMAP-Rule:MF_01430}.
FT SIGNAL 1..23
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01430"
FT CHAIN 24..827
FT /note="Outer membrane protein assembly factor BamA"
FT /evidence="ECO:0000256|HAMAP-Rule:MF_01430"
FT /id="PRO_5009018789"
FT DOMAIN 29..96
FT /note="POTRA"
FT /evidence="ECO:0000259|PROSITE:PS51779"
FT DOMAIN 97..177
FT /note="POTRA"
FT /evidence="ECO:0000259|PROSITE:PS51779"
FT DOMAIN 180..268
FT /note="POTRA"
FT /evidence="ECO:0000259|PROSITE:PS51779"
FT DOMAIN 271..349
FT /note="POTRA"
FT /evidence="ECO:0000259|PROSITE:PS51779"
FT DOMAIN 352..426
FT /note="POTRA"
FT /evidence="ECO:0000259|PROSITE:PS51779"
SQ SEQUENCE 827 AA; 92890 MW; 1BF6493F65A56F9D CRC64;
MRFNKIFASM LFVGASFSGN GWAESFQPFE VTDIQVEGLQ RVALGAALLS LPVKVGDTVD
EVKLQQAIKS LYGSTNFENI SVSHEDGILY VTVKERPTIS IISFDGNKDI KDEQLQESLD
GSGVKAGESL DRTMLSGIEK GLQDFYYGVG KYGAKVEAQI INLPRNRVEL KFKFTEGLAA
EIRQINVVGN TVFSDSELIS MLELKDYVAW WDLFGERRYQ KQKLQADLET IKTYYHNQGY
IRFEVTSTQV AMTPDRKGLY ITINVNEGEK YKVKEVNLIG DLMGREELMR SILPIKAGNM
YNGADVTFTE EMYSKYLGRF GYAYPEVKTY PEIDDETKEV VLNINVKPGK RVYVRSINFT
GNTVTKDEVM RRELRQMEGA WLNSAQIEQS KLRLNRLGYF ETVDAETIQV PGSDDLVDVA
VTVKEQPSGS FNAGVGYGTE SGVSLQFGVE QNNFLGTGNQ AGFSVNTNKY SKSANLSYTD
PYFTKDGVSL GGSVYWNEFD ANEANLERYK NKSYGVALNS GFPINEYNRL NGGIGYRHNT
ISEISAYEQA LRFYNVYRET DDPNSDLSFD NFELNAGWYR STLNRGTFPT DGSSQRLSGK
MTVPGSDLQY FKTDFDTNFY FPLTPQHGFV LLARARLGYS NGYGQFNDND QILPFWENYY
SGGSSSLRGF KSNSVGPRSF YLYRGSEQCA PDVSGDGCSL PGDPNTIQVS SGRSIGGNAI
ATASFEMIVP TPFLDEAYTN SVRTSFFVDA GNVWDTEFDY DSYRTLPADQ FSKLEDYSDP
ERLRASWGMS VQWLSPMGPM VFSLAWPLKE YEDDETEIFS FNIGKTF
//