GenomeNet

Database: UniProt
Entry: Q085D4_SHEFN
LinkDB: Q085D4_SHEFN
Original site: Q085D4_SHEFN 
ID   Q085D4_SHEFN            Unreviewed;       827 AA.
AC   Q085D4;
DT   31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT   31-OCT-2006, sequence version 1.
DT   24-JAN-2024, entry version 100.
DE   RecName: Full=Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430};
DE   Flags: Precursor;
GN   Name=bamA {ECO:0000256|HAMAP-Rule:MF_01430};
GN   OrderedLocusNames=Sfri_1278 {ECO:0000313|EMBL:ABI71131.1};
OS   Shewanella frigidimarina (strain NCIMB 400).
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=318167 {ECO:0000313|EMBL:ABI71131.1, ECO:0000313|Proteomes:UP000000684};
RN   [1] {ECO:0000313|EMBL:ABI71131.1, ECO:0000313|Proteomes:UP000000684}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NCIMB 400 {ECO:0000313|EMBL:ABI71131.1,
RC   ECO:0000313|Proteomes:UP000000684};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA   Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T., Nealson K.H.,
RA   Newman D., Tiedje J.M., Zhou J., Romine M.F., Culley D.E., Serres M.,
RA   Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.,
RA   Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.;
RT   "Complete sequence of Shewanella frigidimarina NCIMB 400.";
RL   Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Part of the outer membrane protein assembly complex, which is
CC       involved in assembly and insertion of beta-barrel proteins into the
CC       outer membrane. {ECO:0000256|HAMAP-Rule:MF_01430}.
CC   -!- SUBUNIT: Part of the Bam complex. {ECO:0000256|HAMAP-Rule:MF_01430}.
CC   -!- SUBCELLULAR LOCATION: Cell outer membrane {ECO:0000256|HAMAP-
CC       Rule:MF_01430}. Membrane {ECO:0000256|ARBA:ARBA00004370}.
CC   -!- SIMILARITY: Belongs to the BamA family. {ECO:0000256|HAMAP-
CC       Rule:MF_01430}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP000447; ABI71131.1; -; Genomic_DNA.
DR   RefSeq; WP_011636752.1; NC_008345.1.
DR   AlphaFoldDB; Q085D4; -.
DR   STRING; 318167.Sfri_1278; -.
DR   KEGG; sfr:Sfri_1278; -.
DR   eggNOG; COG4775; Bacteria.
DR   HOGENOM; CLU_007664_1_0_6; -.
DR   OMA; IFMPAFG; -.
DR   OrthoDB; 9803054at2; -.
DR   Proteomes; UP000000684; Chromosome.
DR   GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IEA:UniProtKB-UniRule.
DR   GO; GO:0051205; P:protein insertion into membrane; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.10.20.310; membrane protein fhac; 5.
DR   Gene3D; 2.40.160.50; membrane protein fhac: a member of the omp85/tpsb transporter family; 1.
DR   HAMAP; MF_01430; OM_assembly_BamA; 1.
DR   InterPro; IPR000184; Bac_surfAg_D15.
DR   InterPro; IPR010827; BamA/TamA_POTRA.
DR   InterPro; IPR039910; D15-like.
DR   InterPro; IPR023707; OM_assembly_BamA.
DR   InterPro; IPR034746; POTRA.
DR   NCBIfam; TIGR03303; OM_YaeT; 1.
DR   PANTHER; PTHR12815:SF23; OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMA; 1.
DR   PANTHER; PTHR12815; SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER; 1.
DR   Pfam; PF01103; Omp85; 1.
DR   Pfam; PF07244; POTRA; 4.
DR   PIRSF; PIRSF006076; OM_assembly_OMP85; 1.
DR   PROSITE; PS51779; POTRA; 5.
PE   3: Inferred from homology;
KW   Cell outer membrane {ECO:0000256|HAMAP-Rule:MF_01430};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|HAMAP-Rule:MF_01430};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000684};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737, ECO:0000256|HAMAP-Rule:MF_01430};
KW   Signal {ECO:0000256|HAMAP-Rule:MF_01430};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|HAMAP-
KW   Rule:MF_01430};
KW   Transmembrane beta strand {ECO:0000256|ARBA:ARBA00022452,
KW   ECO:0000256|HAMAP-Rule:MF_01430}.
FT   SIGNAL          1..23
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01430"
FT   CHAIN           24..827
FT                   /note="Outer membrane protein assembly factor BamA"
FT                   /evidence="ECO:0000256|HAMAP-Rule:MF_01430"
FT                   /id="PRO_5009018789"
FT   DOMAIN          29..96
FT                   /note="POTRA"
FT                   /evidence="ECO:0000259|PROSITE:PS51779"
FT   DOMAIN          97..177
FT                   /note="POTRA"
FT                   /evidence="ECO:0000259|PROSITE:PS51779"
FT   DOMAIN          180..268
FT                   /note="POTRA"
FT                   /evidence="ECO:0000259|PROSITE:PS51779"
FT   DOMAIN          271..349
FT                   /note="POTRA"
FT                   /evidence="ECO:0000259|PROSITE:PS51779"
FT   DOMAIN          352..426
FT                   /note="POTRA"
FT                   /evidence="ECO:0000259|PROSITE:PS51779"
SQ   SEQUENCE   827 AA;  92890 MW;  1BF6493F65A56F9D CRC64;
     MRFNKIFASM LFVGASFSGN GWAESFQPFE VTDIQVEGLQ RVALGAALLS LPVKVGDTVD
     EVKLQQAIKS LYGSTNFENI SVSHEDGILY VTVKERPTIS IISFDGNKDI KDEQLQESLD
     GSGVKAGESL DRTMLSGIEK GLQDFYYGVG KYGAKVEAQI INLPRNRVEL KFKFTEGLAA
     EIRQINVVGN TVFSDSELIS MLELKDYVAW WDLFGERRYQ KQKLQADLET IKTYYHNQGY
     IRFEVTSTQV AMTPDRKGLY ITINVNEGEK YKVKEVNLIG DLMGREELMR SILPIKAGNM
     YNGADVTFTE EMYSKYLGRF GYAYPEVKTY PEIDDETKEV VLNINVKPGK RVYVRSINFT
     GNTVTKDEVM RRELRQMEGA WLNSAQIEQS KLRLNRLGYF ETVDAETIQV PGSDDLVDVA
     VTVKEQPSGS FNAGVGYGTE SGVSLQFGVE QNNFLGTGNQ AGFSVNTNKY SKSANLSYTD
     PYFTKDGVSL GGSVYWNEFD ANEANLERYK NKSYGVALNS GFPINEYNRL NGGIGYRHNT
     ISEISAYEQA LRFYNVYRET DDPNSDLSFD NFELNAGWYR STLNRGTFPT DGSSQRLSGK
     MTVPGSDLQY FKTDFDTNFY FPLTPQHGFV LLARARLGYS NGYGQFNDND QILPFWENYY
     SGGSSSLRGF KSNSVGPRSF YLYRGSEQCA PDVSGDGCSL PGDPNTIQVS SGRSIGGNAI
     ATASFEMIVP TPFLDEAYTN SVRTSFFVDA GNVWDTEFDY DSYRTLPADQ FSKLEDYSDP
     ERLRASWGMS VQWLSPMGPM VFSLAWPLKE YEDDETEIFS FNIGKTF
//
DBGET integrated database retrieval system