ID Q085U7_SHEFN Unreviewed; 325 AA.
AC Q085U7;
DT 31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2006, sequence version 1.
DT 27-MAR-2024, entry version 66.
DE RecName: Full=HTH cro/C1-type domain-containing protein {ECO:0000259|PROSITE:PS50943};
GN OrderedLocusNames=Sfri_1115 {ECO:0000313|EMBL:ABI70968.1};
OS Shewanella frigidimarina (strain NCIMB 400).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=318167 {ECO:0000313|EMBL:ABI70968.1, ECO:0000313|Proteomes:UP000000684};
RN [1] {ECO:0000313|EMBL:ABI70968.1, ECO:0000313|Proteomes:UP000000684}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCIMB 400 {ECO:0000313|EMBL:ABI70968.1,
RC ECO:0000313|Proteomes:UP000000684};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T., Nealson K.H.,
RA Newman D., Tiedje J.M., Zhou J., Romine M.F., Culley D.E., Serres M.,
RA Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.;
RT "Complete sequence of Shewanella frigidimarina NCIMB 400.";
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP000447; ABI70968.1; -; Genomic_DNA.
DR RefSeq; WP_011636589.1; NC_008345.1.
DR AlphaFoldDB; Q085U7; -.
DR STRING; 318167.Sfri_1115; -.
DR KEGG; sfr:Sfri_1115; -.
DR eggNOG; COG1426; Bacteria.
DR HOGENOM; CLU_047530_3_1_6; -.
DR OrthoDB; 9790252at2; -.
DR Proteomes; UP000000684; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR025194; RodZ-like_C.
DR PANTHER; PTHR34475; -; 1.
DR PANTHER; PTHR34475:SF1; CYTOSKELETON PROTEIN RODZ; 1.
DR Pfam; PF13413; HTH_25; 1.
DR Pfam; PF13464; RodZ_C; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000684};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 119..139
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 27..58
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 325 AA; 34760 MW; E1B493433599A13D CRC64;
MTKEFEVEQD AEKAPLLKDV VTAGAILKAA REAKGLSLET VATQLHLRPK IINDLENDIF
VNIASTTYVR GYIKNYARVV NADINQIQQC LSHQLPEIVA PAMQSFSRKT THQARNSRLN
LVTYLIVAVL IAMLVLWWVQ KSSLLTNIDL SQPTVEEIAA ESNMPEPQQI IRSGSVQSSG
NGLDNEGNVS ATDVANQAAI EAEDKLIQTA QDAATASQSL PASSVVESTN IVSSSTADTS
LAGAESVLTI ELTGDCWVNV TDANGKVMVD GVKNAAQRIE VRGIKPFKVI LGAPQVASIS
LDGNNVSLAE FANGRVARLT LPKAS
//
