ID Q087E2_SHEFN Unreviewed; 681 AA.
AC Q087E2;
DT 31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2006, sequence version 1.
DT 27-MAR-2024, entry version 83.
DE SubName: Full=Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ABI70623.1};
DE Flags: Precursor;
GN OrderedLocusNames=Sfri_0767 {ECO:0000313|EMBL:ABI70623.1};
OS Shewanella frigidimarina (strain NCIMB 400).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=318167 {ECO:0000313|EMBL:ABI70623.1, ECO:0000313|Proteomes:UP000000684};
RN [1] {ECO:0000313|EMBL:ABI70623.1, ECO:0000313|Proteomes:UP000000684}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCIMB 400 {ECO:0000313|EMBL:ABI70623.1,
RC ECO:0000313|Proteomes:UP000000684};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T., Nealson K.H.,
RA Newman D., Tiedje J.M., Zhou J., Romine M.F., Culley D.E., Serres M.,
RA Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.;
RT "Complete sequence of Shewanella frigidimarina NCIMB 400.";
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP000447; ABI70623.1; -; Genomic_DNA.
DR RefSeq; WP_011636246.1; NC_008345.1.
DR AlphaFoldDB; Q087E2; -.
DR STRING; 318167.Sfri_0767; -.
DR KEGG; sfr:Sfri_0767; -.
DR eggNOG; COG5001; Bacteria.
DR HOGENOM; CLU_000445_70_46_6; -.
DR OrthoDB; 9176779at2; -.
DR Proteomes; UP000000684; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd06225; HAMP; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 6.10.340.10; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR InterPro; IPR033417; CHASE8.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR003660; HAMP_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR PANTHER; PTHR33121; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR PANTHER; PTHR33121:SF71; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR Pfam; PF17152; CHASE8; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF00672; HAMP; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00304; HAMP; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF158472; HAMP domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50885; HAMP; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000684};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 16..36
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 150..173
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 175..228
FT /note="HAMP"
FT /evidence="ECO:0000259|PROSITE:PS50885"
FT DOMAIN 279..412
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 421..676
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 681 AA; 77115 MW; 4375FF46099B9C69 CRC64;
MKQFFALNTI SKKLQFILMS VALISTLTVT SIFSAFELSS AKREQVESLH SLSQMLSPNI
TAALLFDDQD AIQELINPIL LRSDVLSVSV TNVEGAVLAQ ALSKRPSMTL TDDDLNDITQ
VITPLTLDNQ NYGDLHISVD DSIITDRISF YGQFIVLLLL SSLCASFFLS LFLRRKFLSP
MLYLAKISQK ITESQDYSLR AQIQSEDEIG QLTTCFNSML DNIEQRESSL ETEVKLRTGE
LENANSQLHE YAYQDGLTLL PNRRYFYEKL QSLIDTDHMV FALIFIDLDG FKEINDSLGH
EYGDRLLHQV AKRLRGCVRD HDTVARLGGD EFTLIIEDVS DLEHAASIAE KVKSSLMQCI
SIEEVQVNVT GSIGLTFYPA DGQNVEALVK HADQAMYLSK SKGRNRYEFF SHAIEEQAIE
KRRLIEEIRI ALKLGQFVLF YQPIFDQCGV TVTKAEALIR WDHPQRGLIG PNEFIPVAEQ
NGLIEEIGNW VRNQAIEDAA HFYQLSGNKM QVSVNTSPLQ IDHEGLWVDE WILACNKFNL
PRDTMIIEVT ENTLMDPDSP IQQQMLRLNN YGIDIAIDDF GVGYSSLAYL QRLDIDILKI
DRSFIKHMES NENSIALVRA IITMAHHLKV KVVAEGVETI GQHQLLQQLS CDYLQGYLFA
KPMPTQNFID RYVRSSTLAA E
//