ID Q088F5_SHEFN Unreviewed; 364 AA.
AC Q088F5;
DT 31-OCT-2006, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2006, sequence version 1.
DT 27-MAR-2024, entry version 88.
DE SubName: Full=Secretion protein HlyD family protein {ECO:0000313|EMBL:ABI70360.1};
DE Flags: Precursor;
GN OrderedLocusNames=Sfri_0499 {ECO:0000313|EMBL:ABI70360.1};
OS Shewanella frigidimarina (strain NCIMB 400).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=318167 {ECO:0000313|EMBL:ABI70360.1, ECO:0000313|Proteomes:UP000000684};
RN [1] {ECO:0000313|EMBL:ABI70360.1, ECO:0000313|Proteomes:UP000000684}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCIMB 400 {ECO:0000313|EMBL:ABI70360.1,
RC ECO:0000313|Proteomes:UP000000684};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Fredrickson J.K., Kolker E., McCuel L.A., DiChristina T., Nealson K.H.,
RA Newman D., Tiedje J.M., Zhou J., Romine M.F., Culley D.E., Serres M.,
RA Chertkov O., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Richardson P.;
RT "Complete sequence of Shewanella frigidimarina NCIMB 400.";
RL Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the membrane fusion protein (MFP) (TC 8.A.1)
CC family. {ECO:0000256|ARBA:ARBA00009477}.
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DR EMBL; CP000447; ABI70360.1; -; Genomic_DNA.
DR RefSeq; WP_011635987.1; NC_008345.1.
DR AlphaFoldDB; Q088F5; -.
DR STRING; 318167.Sfri_0499; -.
DR KEGG; sfr:Sfri_0499; -.
DR eggNOG; COG1566; Bacteria.
DR HOGENOM; CLU_018816_15_1_6; -.
DR OrthoDB; 9811754at2; -.
DR Proteomes; UP000000684; Chromosome.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR Gene3D; 2.40.30.170; -; 1.
DR Gene3D; 2.40.50.100; -; 1.
DR Gene3D; 1.10.287.470; Helix hairpin bin; 2.
DR InterPro; IPR043602; CusB_dom_1.
DR InterPro; IPR032317; HlyD_D23.
DR PANTHER; PTHR30386; MEMBRANE FUSION SUBUNIT OF EMRAB-TOLC MULTIDRUG EFFLUX PUMP; 1.
DR PANTHER; PTHR30386:SF24; MULTIDRUG RESISTANCE EFFLUX PUMP; 1.
DR Pfam; PF00529; CusB_dom_1; 1.
DR Pfam; PF16576; HlyD_D23; 1.
DR SUPFAM; SSF111369; HlyD-like secretion proteins; 2.
PE 3: Inferred from homology;
KW Cell inner membrane {ECO:0000256|ARBA:ARBA00022519};
KW Cell membrane {ECO:0000256|ARBA:ARBA00022519};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000000684};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 7..26
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 18..327
FT /note="Cation efflux system protein CusB"
FT /evidence="ECO:0000259|Pfam:PF00529"
FT DOMAIN 38..286
FT /note="RND efflux pump membrane fusion protein barrel-
FT sandwich"
FT /evidence="ECO:0000259|Pfam:PF16576"
SQ SEQUENCE 364 AA; 39148 MW; 6665868911ECEF81 CRC64;
MSINKRLVLV PSIIVVLVVA GVYWWSQVRY IESTDNAYVE ADISNISVKV PGYIVQSTVV
DNQHVNKGEL LAQLEDSQFV AKLAQSKAVL ASTQANLQTL AAKVDLQQAL INQAKATVVA
SQSEQLIAQQ QLKRSQKLKI SNYSSQNDVD QLQAGFDSAS AHVDEAQAAL VAKQRELSVF
NAQLLQVQAD VDQAMASVEL ANIQLVDTRV TAPFSGIIGK RGAMVGQYVQ PGQALFSLVP
DAQVWITANF KETQIEHMQA GQAVKVSLDA YPDYVFSGFI DSLAPASGSK FSLLPAENAT
GNFTKIVQRI PVRIRLEHDQ PSSAIGRILP GLSALVEVDT ESATQSHELA KASAVQATSV
TAGH
//
