ID Q0RDG1_FRAAA Unreviewed; 765 AA.
AC Q0RDG1;
DT 05-SEP-2006, integrated into UniProtKB/TrEMBL.
DT 05-SEP-2006, sequence version 1.
DT 27-MAR-2024, entry version 106.
DE SubName: Full=Glycosyl hydrolase {ECO:0000313|EMBL:CAJ64508.1};
DE EC=3.2.1.68 {ECO:0000313|EMBL:CAJ64508.1};
GN Name=glgX {ECO:0000313|EMBL:CAJ64508.1};
GN OrderedLocusNames=FRAAL5883 {ECO:0000313|EMBL:CAJ64508.1};
OS Frankia alni (strain DSM 45986 / CECT 9034 / ACN14a).
OC Bacteria; Actinomycetota; Actinomycetes; Frankiales; Frankiaceae; Frankia.
OX NCBI_TaxID=326424 {ECO:0000313|EMBL:CAJ64508.1, ECO:0000313|Proteomes:UP000000657};
RN [1] {ECO:0000313|EMBL:CAJ64508.1, ECO:0000313|Proteomes:UP000000657}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ACN14a {ECO:0000313|Proteomes:UP000000657};
RX PubMed=17151343; DOI=10.1101/gr.5798407;
RA Normand P., Lapierre P., Tisa L.S., Gogarten J.P., Alloisio N.,
RA Bagnarol E., Bassi C.A., Berry A.M., Bickhart D.M., Choisne N., Couloux A.,
RA Cournoyer B., Cruveiller S., Daubin V., Demange N., Francino M.P.,
RA Goltsman E., Huang Y., Kopp O.R., Labarre L., Lapidus A., Lavire C.,
RA Marechal J., Martinez M., Mastronunzio J.E., Mullin B.C., Niemann J.,
RA Pujic P., Rawnsley T., Rouy Z., Schenowitz C., Sellstedt A., Tavares F.,
RA Tomkins J.P., Vallenet D., Valverde C., Wall L.G., Wang Y., Medigue C.,
RA Benson D.R.;
RT "Genome characteristics of facultatively symbiotic Frankia sp. strains
RT reflect host range and host plant biogeography.";
RL Genome Res. 17:7-15(2007).
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family.
CC {ECO:0000256|ARBA:ARBA00008061}.
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DR EMBL; CT573213; CAJ64508.1; -; Genomic_DNA.
DR RefSeq; WP_011606944.1; NC_008278.1.
DR AlphaFoldDB; Q0RDG1; -.
DR STRING; 326424.FRAAL5883; -.
DR CAZy; CBM48; Carbohydrate-Binding Module Family 48.
DR CAZy; GH13; Glycoside Hydrolase Family 13.
DR KEGG; fal:FRAAL5883; -.
DR eggNOG; COG1523; Bacteria.
DR HOGENOM; CLU_011725_1_1_11; -.
DR Proteomes; UP000000657; Chromosome.
DR GO; GO:0004133; F:glycogen debranching enzyme activity; IEA:InterPro.
DR GO; GO:0019156; F:isoamylase activity; IEA:UniProtKB-EC.
DR GO; GO:0005980; P:glycogen catabolic process; IEA:InterPro.
DR CDD; cd11326; AmyAc_Glg_debranch; 1.
DR CDD; cd02856; E_set_GDE_Isoamylase_N; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044505; GlgX_Isoamylase_N_E_set.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR004193; Glyco_hydro_13_N.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR011837; Glycogen_debranch_GlgX.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR NCBIfam; TIGR02100; glgX_debranch; 1.
DR PANTHER; PTHR43002; GLYCOGEN DEBRANCHING ENZYME; 1.
DR PANTHER; PTHR43002:SF1; ISOAMYLASE 1, CHLOROPLASTIC; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR Pfam; PF02922; CBM_48; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 3: Inferred from homology;
KW Glycosidase {ECO:0000313|EMBL:CAJ64508.1};
KW Hydrolase {ECO:0000313|EMBL:CAJ64508.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000000657}.
FT DOMAIN 176..569
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
FT REGION 479..509
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 479..493
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 765 AA; 81656 MW; FA14606463AFF062 CRC64;
MSPRSGGGPH PGRPGPLGVI WDGAGVNIAV AAPGAEAVEF CLFDDADRES RHRLPERDGE
VWHGYLPGVG PGQRYGLRAH GPYDPSRGQR YNPAKLLVDP YARLLTGALR PDPAIYGFGG
GDPYGYEPDA RDSAPFVPRC VVAGPTRRDG ARRRGRGRHP ADNRPAIPWS QTVLYEAHVR
GFTRLHPGLP ARLRGTYAGL AHPAVVDHLH RVGVTALELL PVQASVSEPA LLERSKTNYW
GYNTLGFFAP HAAYAATGDP IGEFQTMVST LHAAGIEVIL DVVYNHSAEG SERGPTLSLR
GLDNATYYRL EPTDPRRYRD VTGCGNTLNM TSPHVVKLIC DSLRYWVSEM GVDGFRFDLA
TALARNPDSF DPAAGLLTAI HADPLLSSVK LIAEPWDVGW GGYQVGSFPA PWAEWNGRFR
DTVRDVWNGR SSGVADLGYR VTGSSDLFEH GGRRPWASVN FVTAHDGFPL ADLVSYAEKH
NEANDEGNRD GESDNRSWNY GAEGPTDDPT ILATRRRVRR GLLATLLLSA GVPMLLAGDE
FGRSQGGNNN AYCQDNPVSW LAWPVSGSRP ETRAGAAGAA GAAGAAGRDP AGPDAALTRL
VSGLISLRRL EPALRREVFF HGGESGPDRL ADITWFRADG QVMSTADWNA PKVVTLVAHI
APGTCAGTAP DTTSGAVPGG LPGTGRDGGR APGLLGVIHP DGADTAVTLP AAPWAQRYDL
LLDTADEDLA GFPATLADPR RTLLPGAVVP VRARSVLLLR AHPPA
//
