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Database: UniProt
Entry: Q12LJ8
LinkDB: Q12LJ8
Original site: Q12LJ8 
ID   RIMK1_SHEDO             Reviewed;         295 AA.
AC   Q12LJ8;
DT   10-JUN-2008, integrated into UniProtKB/Swiss-Prot.
DT   10-JUN-2008, sequence version 2.
DT   16-JAN-2019, entry version 74.
DE   RecName: Full=Probable alpha-L-glutamate ligase 1 {ECO:0000255|HAMAP-Rule:MF_01552};
DE            EC=6.3.2.- {ECO:0000255|HAMAP-Rule:MF_01552};
GN   Name=rimK1 {ECO:0000255|HAMAP-Rule:MF_01552};
GN   OrderedLocusNames=Sden_2398;
OS   Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Shewanellaceae; Shewanella.
OX   NCBI_TaxID=318161;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=OS217 / ATCC BAA-1090 / DSM 15013;
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H.,
RA   Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H.,
RA   Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A.,
RA   Richardson P.;
RT   "Complete sequence of Shewanella denitrificans OS217.";
RL   Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- COFACTOR:
CC       Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_01552};
CC       Name=Mn(2+); Xref=ChEBI:CHEBI:29035;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_01552};
CC       Note=Binds 2 magnesium or manganese ions per subunit.
CC       {ECO:0000255|HAMAP-Rule:MF_01552};
CC   -!- SIMILARITY: Belongs to the RimK family. {ECO:0000255|HAMAP-
CC       Rule:MF_01552}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=ABE55678.1; Type=Erroneous initiation; Evidence={ECO:0000305};
DR   EMBL; CP000302; ABE55678.1; ALT_INIT; Genomic_DNA.
DR   RefSeq; WP_041406327.1; NC_007954.1.
DR   ProteinModelPortal; Q12LJ8; -.
DR   SMR; Q12LJ8; -.
DR   STRING; 318161.Sden_2398; -.
DR   EnsemblBacteria; ABE55678; ABE55678; Sden_2398.
DR   KEGG; sdn:Sden_2398; -.
DR   eggNOG; ENOG4105D9I; Bacteria.
DR   eggNOG; COG0189; LUCA.
DR   HOGENOM; HOG000293092; -.
DR   KO; K05844; -.
DR   OrthoDB; 937913at2; -.
DR   BioCyc; SDEN318161:G1G6C-2525-MONOMER; -.
DR   Proteomes; UP000001982; Chromosome.
DR   GO; GO:0016881; F:acid-amino acid ligase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006464; P:cellular protein modification process; IEA:InterPro.
DR   GO; GO:0006412; P:translation; IEA:UniProtKB-KW.
DR   Gene3D; 3.30.1490.20; -; 1.
DR   HAMAP; MF_01552; RimK; 1.
DR   InterPro; IPR011761; ATP-grasp.
DR   InterPro; IPR013651; ATP-grasp_RimK-type.
DR   InterPro; IPR013815; ATP_grasp_subdomain_1.
DR   InterPro; IPR023533; RimK.
DR   InterPro; IPR004666; RpS6_RimK/Lys_biosynth_LsyX.
DR   Pfam; PF08443; RimK; 1.
DR   TIGRFAMs; TIGR00768; rimK_fam; 1.
DR   PROSITE; PS50975; ATP_GRASP; 1.
PE   3: Inferred from homology;
KW   ATP-binding; Complete proteome; Ligase; Magnesium; Manganese;
KW   Metal-binding; Nucleotide-binding; Protein biosynthesis;
KW   Reference proteome.
FT   CHAIN         1    295       Probable alpha-L-glutamate ligase 1.
FT                                /FTId=PRO_0000340554.
FT   DOMAIN      104    287       ATP-grasp. {ECO:0000255|HAMAP-
FT                                Rule:MF_01552}.
FT   NP_BIND     178    179       ATP. {ECO:0000255|HAMAP-Rule:MF_01552}.
FT   NP_BIND     211    213       ATP. {ECO:0000255|HAMAP-Rule:MF_01552}.
FT   METAL       248    248       Magnesium or manganese 1.
FT                                {ECO:0000255|HAMAP-Rule:MF_01552}.
FT   METAL       260    260       Magnesium or manganese 1.
FT                                {ECO:0000255|HAMAP-Rule:MF_01552}.
FT   METAL       260    260       Magnesium or manganese 2.
FT                                {ECO:0000255|HAMAP-Rule:MF_01552}.
FT   METAL       262    262       Magnesium or manganese 2.
FT                                {ECO:0000255|HAMAP-Rule:MF_01552}.
FT   BINDING     141    141       ATP. {ECO:0000255|HAMAP-Rule:MF_01552}.
FT   BINDING     187    187       ATP. {ECO:0000255|HAMAP-Rule:MF_01552}.
SQ   SEQUENCE   295 AA;  31835 MW;  C02B0DDE4029F385 CRC64;
     MRIAILSQGP QLYSTKRLVE AAQARGHDVH IINPLKCYMN INMRQPSIHI AGKELPQFDA
     VIPRIGASIT FYGSAVLRQF EMMGVYTIND SVGISRSRDK LRSMQLLSRK GIGLPITGFA
     NKPSDIPDLI DMVGGAPLVV KLLEGTQGIG VVLAETRKAA ESVLEAFMGL KANIMVQEYI
     KEANGADIRC FVLGDKVIAA MKRQAKAGEF RSNLHRGGTA TLVKLSPEER TTAIRAAKTM
     GLSLAGVDLL RSNHGPVVME VNSSPGLEGI EAATQKDVAN AIIEFIEKNA NKAKS
//
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