ID Q12S79_SHEDO Unreviewed; 379 AA.
AC Q12S79;
DT 22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT 22-AUG-2006, sequence version 1.
DT 27-MAR-2024, entry version 100.
DE SubName: Full=Alanine-glyoxylate aminotransferase {ECO:0000313|EMBL:ABE53697.1};
DE EC=2.6.1.44 {ECO:0000313|EMBL:ABE53697.1};
GN OrderedLocusNames=Sden_0404 {ECO:0000313|EMBL:ABE53697.1};
OS Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=318161 {ECO:0000313|EMBL:ABE53697.1, ECO:0000313|Proteomes:UP000001982};
RN [1] {ECO:0000313|EMBL:ABE53697.1, ECO:0000313|Proteomes:UP000001982}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OS217 / ATCC BAA-1090 / DSM 15013
RC {ECO:0000313|Proteomes:UP000001982};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Lykidis A., Richardson P.;
RT "Complete sequence of Shewanella denitrificans OS217.";
RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000256|ARBA:ARBA00001933,
CC ECO:0000256|PIRSR:PIRSR000524-50, ECO:0000256|RuleBase:RU004504};
CC -!- SIMILARITY: Belongs to the class-V pyridoxal-phosphate-dependent
CC aminotransferase family. {ECO:0000256|ARBA:ARBA00009236,
CC ECO:0000256|RuleBase:RU004075}.
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DR EMBL; CP000302; ABE53697.1; -; Genomic_DNA.
DR RefSeq; WP_011494863.1; NC_007954.1.
DR AlphaFoldDB; Q12S79; -.
DR STRING; 318161.Sden_0404; -.
DR KEGG; sdn:Sden_0404; -.
DR eggNOG; COG0075; Bacteria.
DR HOGENOM; CLU_027686_0_0_6; -.
DR OrthoDB; 9766472at2; -.
DR Proteomes; UP000001982; Chromosome.
DR GO; GO:0008453; F:alanine-glyoxylate transaminase activity; IEA:UniProtKB-EC.
DR Gene3D; 3.90.1150.10; Aspartate Aminotransferase, domain 1; 1.
DR Gene3D; 3.40.640.10; Type I PLP-dependent aspartate aminotransferase-like (Major domain); 1.
DR InterPro; IPR000192; Aminotrans_V_dom.
DR InterPro; IPR020578; Aminotrans_V_PyrdxlP_BS.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR015422; PyrdxlP-dep_Trfase_small.
DR InterPro; IPR024169; SP_NH2Trfase/AEP_transaminase.
DR PANTHER; PTHR21152:SF39; ALANINE--GLYOXYLATE AMINOTRANSFERASE; 1.
DR PANTHER; PTHR21152; AMINOTRANSFERASE CLASS V; 1.
DR Pfam; PF00266; Aminotran_5; 1.
DR PIRSF; PIRSF000524; SPT; 1.
DR SUPFAM; SSF53383; PLP-dependent transferases; 1.
DR PROSITE; PS00595; AA_TRANSFER_CLASS_5; 1.
PE 3: Inferred from homology;
KW Aminotransferase {ECO:0000313|EMBL:ABE53697.1};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Pyridoxal phosphate {ECO:0000256|ARBA:ARBA00022898,
KW ECO:0000256|PIRSR:PIRSR000524-50};
KW Reference proteome {ECO:0000313|Proteomes:UP000001982};
KW Transferase {ECO:0000313|EMBL:ABE53697.1}.
FT DOMAIN 37..344
FT /note="Aminotransferase class V"
FT /evidence="ECO:0000259|Pfam:PF00266"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 354
FT /ligand="substrate"
FT /evidence="ECO:0000256|PIRSR:PIRSR000524-1"
FT MOD_RES 202
FT /note="N6-(pyridoxal phosphate)lysine"
FT /evidence="ECO:0000256|PIRSR:PIRSR000524-50"
SQ SEQUENCE 379 AA; 40991 MW; 9F3CE356F27102A9 CRC64;
MISAPTVNSF TPPRRTLMGP GPSDVYPEVL AAQARPTIGH LDPLFVGMMD ELKSLIQYAF
QTKNEMTLAI SAPGSAGMEA CFVNLVEPGE KVIVCRNGVF GERMRQNVER VGALAVVVDN
EWGEPVCPKA VEAALKANPD AKFLAFVHAE TSTGALSDAK TLCRLAQEHD CLSIVDAVTS
LGGVELLVDE WGIDAIYSGS QKCLSCVPGL SPVSFSPKAV AKLMSRKTPV QSWFLDQSLV
MGYWGNKDSG LKRSYHHTAP VNALYALHEA FRLLALEGLE NAWARHKKMH LVLAAGLEQL
GLKFVVAAEH RLPQLNAVYL PQGVDDALVR TQLLEEYNLE IGAGLGALAG KAWRIGLMGF
GARRENVALC LKALEEVMN
//