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Database: UniProt
Entry: Q13HW4_PARXL
LinkDB: Q13HW4_PARXL
Original site: Q13HW4_PARXL 
ID   Q13HW4_PARXL            Unreviewed;       402 AA.
AC   Q13HW4;
DT   22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT   22-AUG-2006, sequence version 1.
DT   24-JAN-2024, entry version 97.
DE   SubName: Full=Orn/DAP/Arg decarboxylase {ECO:0000313|EMBL:ABE36325.1};
DE            EC=4.1.1.20 {ECO:0000313|EMBL:ABE36325.1};
GN   ORFNames=Bxe_C0421 {ECO:0000313|EMBL:ABE36325.1};
OS   Paraburkholderia xenovorans (strain LB400).
OC   Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC   Burkholderiaceae; Paraburkholderia.
OX   NCBI_TaxID=266265 {ECO:0000313|EMBL:ABE36325.1, ECO:0000313|Proteomes:UP000001817};
RN   [1] {ECO:0000313|EMBL:ABE36325.1, ECO:0000313|Proteomes:UP000001817}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=LB400 {ECO:0000313|EMBL:ABE36325.1,
RC   ECO:0000313|Proteomes:UP000001817};
RX   PubMed=17030797; DOI=10.1073/pnas.0606924103;
RA   Chain P.S., Denef V.J., Konstantinidis K.T., Vergez L.M., Agullo L.,
RA   Reyes V.L., Hauser L., Cordova M., Gomez L., Gonzalez M., Land M., Lao V.,
RA   Larimer F., LiPuma J.J., Mahenthiralingam E., Malfatti S.A., Marx C.J.,
RA   Parnell J.J., Ramette A., Richardson P., Seeger M., Smith D., Spilker T.,
RA   Sul W.J., Tsoi T.V., Ulrich L.E., Zhulin I.B., Tiedje J.M.;
RT   "Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome
RT   shaped for versatility.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15280-15287(2006).
CC   -!- COFACTOR:
CC       Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC         Evidence={ECO:0000256|ARBA:ARBA00001933,
CC         ECO:0000256|PIRSR:PIRSR600183-50};
CC   -!- SIMILARITY: Belongs to the Orn/Lys/Arg decarboxylase class-II family.
CC       {ECO:0000256|RuleBase:RU003737}.
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DR   EMBL; CP000272; ABE36325.1; -; Genomic_DNA.
DR   RefSeq; WP_011493581.1; NZ_CP008761.1.
DR   AlphaFoldDB; Q13HW4; -.
DR   STRING; 266265.Bxe_C0421; -.
DR   KEGG; bxb:DR64_8022; -.
DR   KEGG; bxe:Bxe_C0421; -.
DR   PATRIC; fig|266265.5.peg.8185; -.
DR   eggNOG; COG0019; Bacteria.
DR   OMA; NISHHDF; -.
DR   OrthoDB; 9802147at2; -.
DR   Proteomes; UP000001817; Chromosome 3.
DR   GO; GO:0008836; F:diaminopimelate decarboxylase activity; IEA:UniProtKB-EC.
DR   GO; GO:0006596; P:polyamine biosynthetic process; IEA:InterPro.
DR   CDD; cd06839; PLPDE_III_Btrk_like; 1.
DR   Gene3D; 3.20.20.10; Alanine racemase; 1.
DR   InterPro; IPR009006; Ala_racemase/Decarboxylase_C.
DR   InterPro; IPR017530; DCO2ase_PEP1.
DR   InterPro; IPR022643; De-COase2_C.
DR   InterPro; IPR022644; De-COase2_N.
DR   InterPro; IPR000183; Orn/DAP/Arg_de-COase.
DR   InterPro; IPR002433; Orn_de-COase.
DR   InterPro; IPR029066; PLP-binding_barrel.
DR   NCBIfam; TIGR03099; dCO2ase_PEP1; 1.
DR   PANTHER; PTHR43727; DIAMINOPIMELATE DECARBOXYLASE; 1.
DR   PANTHER; PTHR43727:SF2; DIAMINOPIMELATE DECARBOXYLASE 1, CHLOROPLASTIC-RELATED; 1.
DR   Pfam; PF02784; Orn_Arg_deC_N; 1.
DR   Pfam; PF00278; Orn_DAP_Arg_deC; 1.
DR   PRINTS; PR01179; ODADCRBXLASE.
DR   PRINTS; PR01182; ORNDCRBXLASE.
DR   SUPFAM; SSF50621; Alanine racemase C-terminal domain-like; 1.
DR   SUPFAM; SSF51419; PLP-binding barrel; 1.
PE   3: Inferred from homology;
KW   Lyase {ECO:0000313|EMBL:ABE36325.1};
KW   Pyridoxal phosphate {ECO:0000256|PIRSR:PIRSR600183-50}.
FT   DOMAIN          39..284
FT                   /note="Orn/DAP/Arg decarboxylase 2 N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF02784"
FT   DOMAIN          285..380
FT                   /note="Orn/DAP/Arg decarboxylase 2 C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF00278"
FT   ACT_SITE        353
FT                   /note="Proton donor"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR600183-50"
FT   MOD_RES         61
FT                   /note="N6-(pyridoxal phosphate)lysine"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR600183-50"
SQ   SEQUENCE   402 AA;  43555 MW;  E24280FB50498A7A CRC64;
     MTLTFVRRPP GLQFGGLDVR QLADRAGRTP FFAYDRSAID IRVRELRNLL PAGMHLHYSI
     KANPMPAVIH HLAQRVDGFD VASAQEMALA LDAGTAPDAI GFAGPGKSHD DLRRAVASGI
     NVHVESETQL RLVTALGWEL GVQPSVAIRV NPDFQVGHSG MRMGGGAAPF GVDVDQVPAL
     LRELEAREVA LAGFHVFWGS QCLHAATIIK AQRQSADLIL RLASGVPRPL RFVNLGGGFG
     IPYFPGETPL DVKAVCEAMQ DWLPPLCERL PGTTPILELG RYLVGEAGIY VCRVIDRKVS
     RGRTFVVTDG GLHHHLAASG NFGQVLRRNF PVVIGNRPDG VPRERCHVVG CLCTPLDRLA
     DEVELPEAHI GDFVVIMQSG AYGRSASPVR FLSHPEPVEM LV
//
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