ID Q14Q13_SPICI Unreviewed; 106 AA.
AC Q14Q13;
DT 22-AUG-2006, integrated into UniProtKB/TrEMBL.
DT 22-AUG-2006, sequence version 1.
DT 27-MAR-2024, entry version 73.
DE RecName: Full=UPF0122 protein GL982_00755 {ECO:0000256|HAMAP-Rule:MF_00245};
GN Name=ylxM {ECO:0000313|EMBL:CAK98416.1};
GN ORFNames=GL982_00755 {ECO:0000313|EMBL:QIA72304.1}, HHA36_00780
GN {ECO:0000313|EMBL:QJU61112.1}, SCITRI_00165
GN {ECO:0000313|EMBL:APE74079.1}, SPICI02_022
GN {ECO:0000313|EMBL:CAK98416.1};
OS Spiroplasma citri.
OC Bacteria; Mycoplasmatota; Mollicutes; Entomoplasmatales; Spiroplasmataceae;
OC Spiroplasma.
OX NCBI_TaxID=2133 {ECO:0000313|EMBL:CAK98416.1};
RN [1] {ECO:0000313|EMBL:CAK98416.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=GII3-3X {ECO:0000313|EMBL:CAK98416.1};
RA Carle P., Saillard C., Carrere N., Carrere S., Duret S., Eveillard S.,
RA Gaurivaud P., Gourgues G., Gouzy J., Salar P., Verdin E., Breton M.,
RA Blanchard A., Laigret F., Bove J.M., Renaudin J., Foissac X.;
RT "Partial chromosome sequence of Spiroplasma citri reveals extensive viral
RT invasion and important gene decay.";
RL Appl. Environ. Microbiol. 76:3420-3426(2010).
RN [2] {ECO:0000313|EMBL:APE74079.1, ECO:0000313|Proteomes:UP000183717}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=R8-A2 {ECO:0000313|EMBL:APE74079.1,
RC ECO:0000313|Proteomes:UP000183717};
RA Davis R.E., Shao J., Gasparich G., Gaynor B., Donofrio N.;
RT "Complete Genome Sequence of Spiroplasma citri R8A2.";
RL Submitted (SEP-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:QIA72304.1, ECO:0000313|Proteomes:UP000464221}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BLH-13 {ECO:0000313|EMBL:QIA72304.1,
RC ECO:0000313|Proteomes:UP000464221};
RA Yokomi R., Chen J., Rattner R., Selvaraj V., Maheshwari Y., Osman F.,
RA Vidalakis G.;
RT "Whole genome sequencing and comparative genomics analyses of six strains
RT of Spiroplasma citri.";
RL Submitted (JAN-2020) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:QJU61112.1, ECO:0000313|Proteomes:UP000501133}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C5 {ECO:0000313|EMBL:QJU61112.1,
RC ECO:0000313|Proteomes:UP000501133};
RA Rattner R., Dang T., Mello A.F.S., Espindola A.S., Cardwell K.,
RA Fletcher J., Yokomi R., Vidalakis G.;
RT "Genome-wide analyses of Spiroplamsa citri strains and comparison with
RT other spiroplasmas.";
RL Submitted (MAY-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Might take part in the signal recognition particle (SRP)
CC pathway. This is inferred from the conservation of its genetic
CC proximity to ftsY/ffh. May be a regulatory protein.
CC {ECO:0000256|ARBA:ARBA00024764, ECO:0000256|HAMAP-Rule:MF_00245}.
CC -!- SIMILARITY: Belongs to the UPF0122 family.
CC {ECO:0000256|ARBA:ARBA00008720, ECO:0000256|HAMAP-Rule:MF_00245}.
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DR EMBL; CP013197; APE74079.1; -; Genomic_DNA.
DR EMBL; AM285303; CAK98416.1; -; Genomic_DNA.
DR EMBL; CP047428; QIA72304.1; -; Genomic_DNA.
DR EMBL; CP053304; QJU61112.1; -; Genomic_DNA.
DR RefSeq; WP_071891680.1; NZ_CP096808.1.
DR AlphaFoldDB; Q14Q13; -.
DR STRING; 2133.SCITRI_00165; -.
DR GeneID; 54238110; -.
DR KEGG; sck:SCITRI_00165; -.
DR OrthoDB; 404035at2; -.
DR Proteomes; UP000183717; Chromosome.
DR Proteomes; UP000464221; Chromosome.
DR Proteomes; UP000501133; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR HAMAP; MF_00245; UPF0122; 1.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR007394; UPF0122.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR40083; UPF0122 PROTEIN CBO2450/CLC_2298; 1.
DR PANTHER; PTHR40083:SF1; UPF0122 PROTEIN CBO2450_CLC_2298; 1.
DR Pfam; PF04297; UPF0122; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000313|EMBL:QIA72304.1}.
SQ SEQUENCE 106 AA; 12749 MW; 2A6C010C1EF1C2AA CRC64;
MKDLEKSNEL ILLYELYREL LTTKQKEYFE LYFFDDYSLS EIAGLKNVSR NAVYDSLIKI
TNALHKFENN LQLEYKQHQR DILYQEFENI KECAGLIKKL KKIDSD
//
