ID Q163U1_ROSDO Unreviewed; 400 AA.
AC Q163U1;
DT 25-JUL-2006, integrated into UniProtKB/TrEMBL.
DT 25-JUL-2006, sequence version 1.
DT 27-MAR-2024, entry version 86.
DE SubName: Full=LysM domain {ECO:0000313|EMBL:ABG32752.1};
GN Name=lysM {ECO:0000313|EMBL:ABG32752.1};
GN OrderedLocusNames=RD1_3251 {ECO:0000313|EMBL:ABG32752.1};
OS Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp.
OS (strain OCh 114)) (Roseobacter denitrificans).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Roseobacter.
OX NCBI_TaxID=375451 {ECO:0000313|EMBL:ABG32752.1, ECO:0000313|Proteomes:UP000007029};
RN [1] {ECO:0000313|EMBL:ABG32752.1, ECO:0000313|Proteomes:UP000007029}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33942 / OCh 114 {ECO:0000313|Proteomes:UP000007029};
RX PubMed=17098896; DOI=10.1128/JB.01390-06;
RA Swingley W.D., Sadekar S., Mastrian S.D., Matthies H.J., Hao J., Ramos H.,
RA Acharya C.R., Conrad A.L., Taylor H.L., Dejesa L.C., Shah M.K.,
RA O'huallachain M.E., Lince M.T., Blankenship R.E., Beatty J.T.,
RA Touchman J.W.;
RT "The complete genome sequence of Roseobacter denitrificans reveals a
RT mixotrophic rather than photosynthetic metabolism.";
RL J. Bacteriol. 189:683-690(2007).
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DR EMBL; CP000362; ABG32752.1; -; Genomic_DNA.
DR RefSeq; WP_011569368.1; NZ_FOOO01000004.1.
DR AlphaFoldDB; Q163U1; -.
DR STRING; 375451.RD1_3251; -.
DR KEGG; rde:RD1_3251; -.
DR eggNOG; COG0739; Bacteria.
DR eggNOG; COG1388; Bacteria.
DR HOGENOM; CLU_741414_0_0_5; -.
DR OrthoDB; 9795421at2; -.
DR Proteomes; UP000007029; Chromosome.
DR CDD; cd00118; LysM; 1.
DR CDD; cd12797; M23_peptidase; 1.
DR Gene3D; 2.70.70.10; Glucose Permease (Domain IIA); 1.
DR Gene3D; 3.10.350.10; LysM domain; 2.
DR InterPro; IPR011055; Dup_hybrid_motif.
DR InterPro; IPR018392; LysM_dom.
DR InterPro; IPR036779; LysM_dom_sf.
DR InterPro; IPR016047; Peptidase_M23.
DR PANTHER; PTHR21666:SF270; OUTER MEMBRANE ANTIGENIC LIPOPROTEIN B; 1.
DR PANTHER; PTHR21666; PEPTIDASE-RELATED; 1.
DR Pfam; PF01476; LysM; 2.
DR Pfam; PF01551; Peptidase_M23; 1.
DR SMART; SM00257; LysM; 2.
DR SUPFAM; SSF51261; Duplicated hybrid motif; 1.
DR SUPFAM; SSF54106; LysM domain; 1.
DR PROSITE; PS51782; LYSM; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000007029};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..23
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 24..400
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004184035"
FT DOMAIN 181..225
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
FT REGION 233..272
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 246..269
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 400 AA; 41950 MW; E5565167EC9318C1 CRC64;
MVRHFSRTRV RLLFLSASTV ALLGACTQGF DYDLRGIGGG FSTADAASRV GTEPRPQPDD
RGVISYPNYQ VAVAEQGDTI QSVATRLGVD APALASFNGI DETAPLRSGE IIALPNRVAE
PSPLTGAQSD GPIRPGSVDI GALAGNAIDR APETNSGDVR VAALPPASGT AEPASTGKEP
VRHKVERGET AYTISRLYQV PVKSLAEWNG LGSDFAIREG QFLLIPVAMQ APPAAQTEDA
TPLPGTGSPT PTPPSATRPL PPPEPLLSET PAPIDVGERT AASDVARMLF PVNGSIIREY
SKGRNEGINI KAAPGTDVKS ADVGTVAAVT KSAEGVPIIV IRHEPELLTV YANVTDVSVE
KGTRVARGQS IAKLRDGDDA FVHFEVRRGF DSVDPMPFLQ
//
