ID Q1D2I4_MYXXD Unreviewed; 540 AA.
AC Q1D2I4;
DT 11-JUL-2006, integrated into UniProtKB/TrEMBL.
DT 11-JUL-2006, sequence version 1.
DT 27-MAR-2024, entry version 119.
DE SubName: Full=Sigma-54 dependent transcriptional regulator RtcR {ECO:0000313|EMBL:ABF87151.1};
GN Name=rtcR {ECO:0000313|EMBL:ABF87151.1};
GN OrderedLocusNames=MXAN_4983 {ECO:0000313|EMBL:ABF87151.1};
OS Myxococcus xanthus (strain DK1622).
OC Bacteria; Myxococcota; Myxococcia; Myxococcales; Cystobacterineae;
OC Myxococcaceae; Myxococcus.
OX NCBI_TaxID=246197 {ECO:0000313|EMBL:ABF87151.1, ECO:0000313|Proteomes:UP000002402};
RN [1] {ECO:0000313|EMBL:ABF87151.1, ECO:0000313|Proteomes:UP000002402}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DK1622 {ECO:0000313|Proteomes:UP000002402};
RX PubMed=17015832; DOI=10.1073/pnas.0607335103;
RA Goldman B.S., Nierman W.C., Kaiser D., Slater S.C., Durkin A.S.,
RA Eisen J.A., Ronning C.M., Barbazuk W.B., Blanchard M., Field C.,
RA Halling C., Hinkle G., Iartchuk O., Kim H.S., Mackenzie C., Madupu R.,
RA Miller N., Shvartsbeyn A., Sullivan S.A., Vaudin M., Wiegand R.,
RA Kaplan H.B.;
RT "Evolution of sensory complexity recorded in a myxobacterial genome.";
RL Proc. Natl. Acad. Sci. U.S.A. 103:15200-15205(2006).
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DR EMBL; CP000113; ABF87151.1; -; Genomic_DNA.
DR RefSeq; WP_011554961.1; NC_008095.1.
DR AlphaFoldDB; Q1D2I4; -.
DR STRING; 246197.MXAN_4983; -.
DR EnsemblBacteria; ABF87151; ABF87151; MXAN_4983.
DR GeneID; 41362268; -.
DR KEGG; mxa:MXAN_4983; -.
DR eggNOG; COG4650; Bacteria.
DR HOGENOM; CLU_039506_0_0_7; -.
DR OrthoDB; 9770562at2; -.
DR Proteomes; UP000002402; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR009715; RtcR.
DR InterPro; IPR017183; Sigma54_dep_tscrpt_act_RtcR.
DR InterPro; IPR002078; Sigma_54_int.
DR NCBIfam; NF038308; RNA_repair_RtcR; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071:SF14; TRANSCRIPTIONAL REGULATORY PROTEIN RTCR; 1.
DR Pfam; PF06956; RtcR; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PIRSF; PIRSF037354; Txn_actvtr_RtcR; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000002402}.
FT DOMAIN 188..426
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 540 AA; 59726 MW; 75F846FEAE470E6E CRC64;
MAKSRARKTV VLGMLGTTLD NGQGPQRWAR WRPTVALCQQ EDLLVHRLEL LHPPNATSLA
ATLAGDIRQV SPETEVRGRP LRIQNPWDLE ETYGALLDYV RGYAFNPEAE DYLVHITTGT
HIAQICMFLL VESRLIPGKL VQVSPDPRDR AGAGTHTLID LDLSQYDTLA ARFRQEQREG
LAFLKSGIDT RNAAFNRLIE RIEQVAVQSR APLLITGPTG AGKSQLARRI YALKKSRRGV
AGPFVDLNCA TLRGDGAMSA LFGHVKGAFT GALSDRPGLL RQANGGVLFL DEIGELGADE
QAMLLRALED KRFLPVGADR EVESDFQLIA GTNRDLQVEV ERGRFREDLL ARINLWTFRL
PALRERPEDI PPNLLFELDQ SSEAVGTRVT MNKEAQERFL DFATSTEARW AGNFRDLNAA
VLRMATLAAG GRITRDVVDE ELERLREQWR PSGAKAAVVA GDLVAEVLGE NLASELDRFD
RVQLADVLSV CRASRSLSDA GRLLFAQSRA QKKSVNDADR LKKYLARFGL TWADASGRGA
//
