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Database: UniProt
Entry: Q1D4B1_MYXXD
LinkDB: Q1D4B1_MYXXD
Original site: Q1D4B1_MYXXD 
ID   Q1D4B1_MYXXD            Unreviewed;       459 AA.
AC   Q1D4B1;
DT   11-JUL-2006, integrated into UniProtKB/TrEMBL.
DT   11-JUL-2006, sequence version 1.
DT   24-JAN-2024, entry version 126.
DE   SubName: Full=Sigma-54 dependent trancsriptional regulator, Fis family {ECO:0000313|EMBL:ABF88909.1};
GN   OrderedLocusNames=MXAN_4339 {ECO:0000313|EMBL:ABF88909.1};
OS   Myxococcus xanthus (strain DK1622).
OC   Bacteria; Myxococcota; Myxococcia; Myxococcales; Cystobacterineae;
OC   Myxococcaceae; Myxococcus.
OX   NCBI_TaxID=246197 {ECO:0000313|EMBL:ABF88909.1, ECO:0000313|Proteomes:UP000002402};
RN   [1] {ECO:0000313|EMBL:ABF88909.1, ECO:0000313|Proteomes:UP000002402}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DK1622 {ECO:0000313|Proteomes:UP000002402};
RX   PubMed=17015832; DOI=10.1073/pnas.0607335103;
RA   Goldman B.S., Nierman W.C., Kaiser D., Slater S.C., Durkin A.S.,
RA   Eisen J.A., Ronning C.M., Barbazuk W.B., Blanchard M., Field C.,
RA   Halling C., Hinkle G., Iartchuk O., Kim H.S., Mackenzie C., Madupu R.,
RA   Miller N., Shvartsbeyn A., Sullivan S.A., Vaudin M., Wiegand R.,
RA   Kaplan H.B.;
RT   "Evolution of sensory complexity recorded in a myxobacterial genome.";
RL   Proc. Natl. Acad. Sci. U.S.A. 103:15200-15205(2006).
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DR   EMBL; CP000113; ABF88909.1; -; Genomic_DNA.
DR   RefSeq; WP_011554340.1; NC_008095.1.
DR   AlphaFoldDB; Q1D4B1; -.
DR   STRING; 246197.MXAN_4339; -.
DR   EnsemblBacteria; ABF88909; ABF88909; MXAN_4339.
DR   GeneID; 41361651; -.
DR   KEGG; mxa:MXAN_4339; -.
DR   eggNOG; COG1716; Bacteria.
DR   eggNOG; COG3829; Bacteria.
DR   HOGENOM; CLU_000445_119_3_7; -.
DR   OMA; RFHCEVK; -.
DR   OrthoDB; 5485507at2; -.
DR   Proteomes; UP000002402; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd00060; FHA; 1.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 2.60.200.20; -; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR000253; FHA_dom.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR002078; Sigma_54_int.
DR   InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR   InterPro; IPR025944; Sigma_54_int_dom_CS.
DR   InterPro; IPR008984; SMAD_FHA_dom_sf.
DR   PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR   PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR   Pfam; PF00498; FHA; 1.
DR   Pfam; PF00158; Sigma54_activat; 1.
DR   SMART; SM00382; AAA; 1.
DR   SMART; SM00240; FHA; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   SUPFAM; SSF49879; SMAD/FHA domain; 1.
DR   PROSITE; PS50006; FHA_DOMAIN; 1.
DR   PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR   PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR   PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002402};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          61..110
FT                   /note="FHA"
FT                   /evidence="ECO:0000259|PROSITE:PS50006"
FT   DOMAIN          150..379
FT                   /note="Sigma-54 factor interaction"
FT                   /evidence="ECO:0000259|PROSITE:PS50045"
FT   REGION          1..38
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   459 AA;  50438 MW;  B232195F86AA4D27 CRC64;
     MSHTERPQGA GRPAEGPDSV QQTRPTGTGR PGTSGAVRRF RFTVLEGPQP GQSKDSNADT
     FSIGSHGLND FVIEEPTVSR FHCEVKVDHD GARLRDLDSR NGTVLDGVHV RDAYLRGGSI
     LRLGRVSVRF DFSPETNRLL ISDRTTFGEL VGSSPVTRAS FALMERAAAS DATVLLEGET
     GTGKSRAAFA IHQASARASG PFLTVDCGAI PGNLLESELF GHEKGSFTGA IQRRVGAFEE
     ADGGTIFLDE IGELPAELQP KLLRVLENKE IRRLGANGYQ PVNVRVIAAT HRDLRAEVNA
     ARFRSDLFFR LAVVRIIIPA LRERPEDIPL IAERILMAFG AGSEQLAALS TPEFIAQLQH
     AAWPGNVREL RNHLERCLVF QDAMPPDAEE VSAQAVLRSL VDPKQPYAEA RRRALEVFER
     EYLDALLKLH GGKVSQAATA ADMDRVYLYR LLRRHRLRT
//
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