ID Q1D4B1_MYXXD Unreviewed; 459 AA.
AC Q1D4B1;
DT 11-JUL-2006, integrated into UniProtKB/TrEMBL.
DT 11-JUL-2006, sequence version 1.
DT 24-JAN-2024, entry version 126.
DE SubName: Full=Sigma-54 dependent trancsriptional regulator, Fis family {ECO:0000313|EMBL:ABF88909.1};
GN OrderedLocusNames=MXAN_4339 {ECO:0000313|EMBL:ABF88909.1};
OS Myxococcus xanthus (strain DK1622).
OC Bacteria; Myxococcota; Myxococcia; Myxococcales; Cystobacterineae;
OC Myxococcaceae; Myxococcus.
OX NCBI_TaxID=246197 {ECO:0000313|EMBL:ABF88909.1, ECO:0000313|Proteomes:UP000002402};
RN [1] {ECO:0000313|EMBL:ABF88909.1, ECO:0000313|Proteomes:UP000002402}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DK1622 {ECO:0000313|Proteomes:UP000002402};
RX PubMed=17015832; DOI=10.1073/pnas.0607335103;
RA Goldman B.S., Nierman W.C., Kaiser D., Slater S.C., Durkin A.S.,
RA Eisen J.A., Ronning C.M., Barbazuk W.B., Blanchard M., Field C.,
RA Halling C., Hinkle G., Iartchuk O., Kim H.S., Mackenzie C., Madupu R.,
RA Miller N., Shvartsbeyn A., Sullivan S.A., Vaudin M., Wiegand R.,
RA Kaplan H.B.;
RT "Evolution of sensory complexity recorded in a myxobacterial genome.";
RL Proc. Natl. Acad. Sci. U.S.A. 103:15200-15205(2006).
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DR EMBL; CP000113; ABF88909.1; -; Genomic_DNA.
DR RefSeq; WP_011554340.1; NC_008095.1.
DR AlphaFoldDB; Q1D4B1; -.
DR STRING; 246197.MXAN_4339; -.
DR EnsemblBacteria; ABF88909; ABF88909; MXAN_4339.
DR GeneID; 41361651; -.
DR KEGG; mxa:MXAN_4339; -.
DR eggNOG; COG1716; Bacteria.
DR eggNOG; COG3829; Bacteria.
DR HOGENOM; CLU_000445_119_3_7; -.
DR OMA; RFHCEVK; -.
DR OrthoDB; 5485507at2; -.
DR Proteomes; UP000002402; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd00060; FHA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 2.60.200.20; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR000253; FHA_dom.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR InterPro; IPR008984; SMAD_FHA_dom_sf.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF00498; FHA; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00240; FHA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF49879; SMAD/FHA domain; 1.
DR PROSITE; PS50006; FHA_DOMAIN; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000002402};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 61..110
FT /note="FHA"
FT /evidence="ECO:0000259|PROSITE:PS50006"
FT DOMAIN 150..379
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT REGION 1..38
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 459 AA; 50438 MW; B232195F86AA4D27 CRC64;
MSHTERPQGA GRPAEGPDSV QQTRPTGTGR PGTSGAVRRF RFTVLEGPQP GQSKDSNADT
FSIGSHGLND FVIEEPTVSR FHCEVKVDHD GARLRDLDSR NGTVLDGVHV RDAYLRGGSI
LRLGRVSVRF DFSPETNRLL ISDRTTFGEL VGSSPVTRAS FALMERAAAS DATVLLEGET
GTGKSRAAFA IHQASARASG PFLTVDCGAI PGNLLESELF GHEKGSFTGA IQRRVGAFEE
ADGGTIFLDE IGELPAELQP KLLRVLENKE IRRLGANGYQ PVNVRVIAAT HRDLRAEVNA
ARFRSDLFFR LAVVRIIIPA LRERPEDIPL IAERILMAFG AGSEQLAALS TPEFIAQLQH
AAWPGNVREL RNHLERCLVF QDAMPPDAEE VSAQAVLRSL VDPKQPYAEA RRRALEVFER
EYLDALLKLH GGKVSQAATA ADMDRVYLYR LLRRHRLRT
//