ID Q1GDL6_RUEST Unreviewed; 236 AA.
AC Q1GDL6;
DT 27-JUN-2006, integrated into UniProtKB/TrEMBL.
DT 27-JUN-2006, sequence version 1.
DT 27-MAR-2024, entry version 87.
DE SubName: Full=RpsU-divergently transcribed {ECO:0000313|EMBL:ABF65250.1};
GN OrderedLocusNames=TM1040_2518 {ECO:0000313|EMBL:ABF65250.1};
OS Ruegeria sp. (strain TM1040) (Silicibacter sp.).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Ruegeria.
OX NCBI_TaxID=292414 {ECO:0000313|EMBL:ABF65250.1, ECO:0000313|Proteomes:UP000000636};
RN [1] {ECO:0000313|Proteomes:UP000000636}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TM1040 {ECO:0000313|Proteomes:UP000000636};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S.,
RA Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.,
RA Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F.,
RA Richardson P.;
RT "Complete sequence of chromosome of Silicibacter sp. TM1040.";
RL Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABF65250.1, ECO:0000313|Proteomes:UP000000636}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TM1040 {ECO:0000313|EMBL:ABF65250.1,
RC ECO:0000313|Proteomes:UP000000636};
RX PubMed=17526795; DOI=10.1128/AEM.02580-06;
RA Moran M.A., Belas R., Schell M.A., Gonzalez J.M., Sun F., Sun S.,
RA Binder B.J., Edmonds J., Ye W., Orcutt B., Howard E.C., Meile C.,
RA Palefsky W., Goesmann A., Ren Q., Paulsen I., Ulrich L.E., Thompson L.S.,
RA Saunders E., Buchan A.;
RT "Ecological genomics of marine Roseobacters.";
RL Appl. Environ. Microbiol. 73:4559-4569(2007).
CC -!- PATHWAY: Cofactor biosynthesis; ubiquinone biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004749}.
CC -!- SIMILARITY: Belongs to the COQ9 family.
CC {ECO:0000256|ARBA:ARBA00010766}.
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DR EMBL; CP000377; ABF65250.1; -; Genomic_DNA.
DR RefSeq; WP_011539836.1; NC_008044.1.
DR AlphaFoldDB; Q1GDL6; -.
DR STRING; 292414.TM1040_2518; -.
DR KEGG; sit:TM1040_2518; -.
DR eggNOG; COG5590; Bacteria.
DR HOGENOM; CLU_057411_3_0_5; -.
DR OrthoDB; 7201143at2; -.
DR Proteomes; UP000000636; Chromosome.
DR GO; GO:0008289; F:lipid binding; IEA:UniProtKB-KW.
DR GO; GO:0006744; P:ubiquinone biosynthetic process; IEA:UniProtKB-KW.
DR Gene3D; 1.10.357.10; Tetracycline Repressor, domain 2; 1.
DR InterPro; IPR013718; COQ9_C.
DR InterPro; IPR012762; Ubiq_biosynth_COQ9.
DR NCBIfam; TIGR02396; diverge_rpsU; 1.
DR PANTHER; PTHR21427; UBIQUINONE BIOSYNTHESIS PROTEIN COQ9, MITOCHONDRIAL; 1.
DR PANTHER; PTHR21427:SF19; UBIQUINONE BIOSYNTHESIS PROTEIN COQ9, MITOCHONDRIAL; 1.
DR Pfam; PF08511; COQ9; 1.
PE 3: Inferred from homology;
KW Lipid-binding {ECO:0000256|ARBA:ARBA00023121};
KW Mitochondrion {ECO:0000256|ARBA:ARBA00023128};
KW Reference proteome {ECO:0000313|Proteomes:UP000000636};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946};
KW Ubiquinone biosynthesis {ECO:0000256|ARBA:ARBA00022688}.
FT DOMAIN 123..193
FT /note="COQ9 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF08511"
SQ SEQUENCE 236 AA; 26335 MW; F244E41B8F7F541F CRC64;
MAENQGNFTD PSTEIQEKLL DAALMHVTFD GWTPATWDAS VADSGVDSTL AEALFPRRAV
DLAVAYHKRG DAMMLARLKE ADLGSLRFRD RVAAAVRYRL EAVEDKEAVR RGATLFALPQ
HAAEGAKLIW GTADAIWTAL GDTSEDANWY TKRATLSGVY SSTVLFWLGD DSPEHQASWA
FLDRRIDNVM QFESLKAQVN KNPLLKPLLA GPNWLMSHVR APERREDLPG RWQPRA
//
