ID Q1GJY9_RUEST Unreviewed; 338 AA.
AC Q1GJY9;
DT 27-JUN-2006, integrated into UniProtKB/TrEMBL.
DT 27-JUN-2006, sequence version 1.
DT 27-MAR-2024, entry version 96.
DE SubName: Full=Lysine-arginine-ornithine-binding periplasmic protein {ECO:0000313|EMBL:ABF63027.1};
GN OrderedLocusNames=TM1040_0294 {ECO:0000313|EMBL:ABF63027.1};
OS Ruegeria sp. (strain TM1040) (Silicibacter sp.).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Ruegeria.
OX NCBI_TaxID=292414 {ECO:0000313|EMBL:ABF63027.1, ECO:0000313|Proteomes:UP000000636};
RN [1] {ECO:0000313|Proteomes:UP000000636}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TM1040 {ECO:0000313|Proteomes:UP000000636};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S.,
RA Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.,
RA Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F.,
RA Richardson P.;
RT "Complete sequence of chromosome of Silicibacter sp. TM1040.";
RL Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABF63027.1, ECO:0000313|Proteomes:UP000000636}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TM1040 {ECO:0000313|EMBL:ABF63027.1,
RC ECO:0000313|Proteomes:UP000000636};
RX PubMed=17526795; DOI=10.1128/AEM.02580-06;
RA Moran M.A., Belas R., Schell M.A., Gonzalez J.M., Sun F., Sun S.,
RA Binder B.J., Edmonds J., Ye W., Orcutt B., Howard E.C., Meile C.,
RA Palefsky W., Goesmann A., Ren Q., Paulsen I., Ulrich L.E., Thompson L.S.,
RA Saunders E., Buchan A.;
RT "Ecological genomics of marine Roseobacters.";
RL Appl. Environ. Microbiol. 73:4559-4569(2007).
CC -!- SIMILARITY: Belongs to the bacterial solute-binding protein 3 family.
CC {ECO:0000256|ARBA:ARBA00010333}.
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DR EMBL; CP000377; ABF63027.1; -; Genomic_DNA.
DR RefSeq; WP_011537643.1; NC_008044.1.
DR AlphaFoldDB; Q1GJY9; -.
DR STRING; 292414.TM1040_0294; -.
DR KEGG; sit:TM1040_0294; -.
DR eggNOG; COG0834; Bacteria.
DR HOGENOM; CLU_019602_3_2_5; -.
DR OrthoDB; 9777941at2; -.
DR Proteomes; UP000000636; Chromosome.
DR CDD; cd13692; PBP2_BztA; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR InterPro; IPR001638; Solute-binding_3/MltF_N.
DR PANTHER; PTHR30085; AMINO ACID ABC TRANSPORTER PERMEASE; 1.
DR PANTHER; PTHR30085:SF7; AMINO-ACID ABC TRANSPORTER-BINDING PROTEIN YHDW-RELATED; 1.
DR Pfam; PF00497; SBP_bac_3; 1.
DR SMART; SM00062; PBPb; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000636};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..21
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 22..338
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004189330"
FT DOMAIN 33..262
FT /note="Solute-binding protein family 3/N-terminal"
FT /evidence="ECO:0000259|SMART:SM00062"
SQ SEQUENCE 338 AA; 35560 MW; E6589BF8F83DCBAB CRC64;
MNNSVFFGAL TVAGLAAGAA AAGTLDDVKA RDKLNCGVST GLVGFSAPNA NGEWEGFDIA
VCRAVAAAVL GDPSKVEYVP TTGKTRFTAL ASGEIDMLAR NTTWTFSRDV DLKFEFVGVN
YYDGQGFMVP KELGVSSAKE LDGATVCIQT GTTTELNLAD FFRANNISYE PVPIETNAEA
RQQYLAGACD VYTTDASGLA ATRATFDDAA NHVILPEIIS KEPLGPLVRH GDNEWGDVVR
WTLNAMIAAE ELGITSANLA EKAAGTDNPE INRLLGTEGT LGEMLGLEAD FAQKALAAGG
NYGEIFAKTI GEDTPVGLAR GLNAQWTDGG LLYAPPFR
//
