ID Q1GMJ8_RUEST Unreviewed; 526 AA.
AC Q1GMJ8;
DT 27-JUN-2006, integrated into UniProtKB/TrEMBL.
DT 27-JUN-2006, sequence version 1.
DT 27-MAR-2024, entry version 95.
DE SubName: Full=Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ABF62118.1};
GN OrderedLocusNames=TM1040_3144 {ECO:0000313|EMBL:ABF62118.1};
OS Ruegeria sp. (strain TM1040) (Silicibacter sp.).
OG Plasmid megaplasmid TM1040 {ECO:0000313|Proteomes:UP000000636}.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Ruegeria.
OX NCBI_TaxID=292414 {ECO:0000313|EMBL:ABF62118.1, ECO:0000313|Proteomes:UP000000636};
RN [1] {ECO:0000313|Proteomes:UP000000636}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TM1040 {ECO:0000313|Proteomes:UP000000636};
RC PLASMID=megaplasmid TM1040 {ECO:0000313|Proteomes:UP000000636};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S.,
RA Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.,
RA Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F.,
RA Richardson P.;
RT "Complete sequence of megaplasmid of Silicibacter sp. TM1040.";
RL Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABF62118.1, ECO:0000313|Proteomes:UP000000636}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TM1040 {ECO:0000313|EMBL:ABF62118.1,
RC ECO:0000313|Proteomes:UP000000636};
RC PLASMID=megaplasmid TM1040 {ECO:0000313|Proteomes:UP000000636};
RX PubMed=17526795; DOI=10.1128/AEM.02580-06;
RA Moran M.A., Belas R., Schell M.A., Gonzalez J.M., Sun F., Sun S.,
RA Binder B.J., Edmonds J., Ye W., Orcutt B., Howard E.C., Meile C.,
RA Palefsky W., Goesmann A., Ren Q., Paulsen I., Ulrich L.E., Thompson L.S.,
RA Saunders E., Buchan A.;
RT "Ecological genomics of marine Roseobacters.";
RL Appl. Environ. Microbiol. 73:4559-4569(2007).
CC -!- FUNCTION: Probably part of an ABC transporter complex that could be
CC involved in peptide import. {ECO:0000256|ARBA:ARBA00037680}.
CC -!- SIMILARITY: Belongs to the bacterial solute-binding protein 5 family.
CC {ECO:0000256|ARBA:ARBA00005695}.
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DR EMBL; CP000376; ABF62118.1; -; Genomic_DNA.
DR RefSeq; WP_011536764.1; NC_008043.1.
DR AlphaFoldDB; Q1GMJ8; -.
DR KEGG; sit:TM1040_3144; -.
DR HOGENOM; CLU_017028_7_4_5; -.
DR OrthoDB; 9803988at2; -.
DR Proteomes; UP000000636; Plasmid megaplasmid TM1040.
DR GO; GO:0043190; C:ATP-binding cassette (ABC) transporter complex; IEA:InterPro.
DR GO; GO:0030288; C:outer membrane-bounded periplasmic space; IEA:UniProt.
DR GO; GO:0055085; P:transmembrane transport; IEA:InterPro.
DR CDD; cd08498; PBP2_NikA_DppA_OppA_like_2; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 1.
DR InterPro; IPR030678; Peptide/Ni-bd.
DR InterPro; IPR039424; SBP_5.
DR InterPro; IPR000914; SBP_5_dom.
DR PANTHER; PTHR30290:SF88; OLIGOPEPTIDE-BINDING PROTEIN APPA; 1.
DR PANTHER; PTHR30290; PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER; 1.
DR Pfam; PF00496; SBP_bac_5; 1.
DR PIRSF; PIRSF002741; MppA; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
PE 3: Inferred from homology;
KW Plasmid {ECO:0000313|EMBL:ABF62118.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000000636};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..22
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 23..526
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004189383"
FT DOMAIN 66..443
FT /note="Solute-binding protein family 5"
FT /evidence="ECO:0000259|Pfam:PF00496"
SQ SEQUENCE 526 AA; 58272 MW; 55FE1CB3F7BA5DF3 CRC64;
MKTTTVLTLT SLLLASAAPL SAETLRWARS GDALTLDPHA QNEGPTHTVR HQMYEPLIIR
DVTGAFEPAL ATEWAPKEGD PNVWVFKLRE GVKFHGGEDF TAEDVVFSFE RAKQANSDMK
ELIGSITEVR AVDDLTVEIV TDGPNPILPS NLTNLFIMDK GWTEANNTVN VQDFEGGEIT
YATTNANGTG PYVLQSREPD VKTVMTLNEN YWGKDQFPLE VTEIVYTPIQ NPATRVAALL
SGEIDFLQDM PVQDLDRVSG ADGLMVRKAP QNRVIFFGMN MGADDIEADN VDGKNPLADV
RVRKAMSMAI NRDAIQKVVM RGQSQPAGMI APPFVNGWTE EMDSESKTDI EGAKALMAEA
GYADGFSIRL DCPNDRYVND EPICQAAVGM LGQIGITVNL DAKPKAQHFP LITDGKTDFY
MLGWGVPTYD SEYIFNFLVH GRESDIGTWN GTGFDNDELD AKIKSLASNT DLEARNQDIA
DIWRVVQDEQ LYIPIHHQVL NWGMSEKVDI AVDPEDQPKV KYFKMN
//
