ID Q1N1E2_9GAMM Unreviewed; 229 AA.
AC Q1N1E2;
DT 30-MAY-2006, integrated into UniProtKB/TrEMBL.
DT 30-MAY-2006, sequence version 1.
DT 24-JAN-2024, entry version 78.
DE SubName: Full=Probable transcriptional regulator {ECO:0000313|EMBL:EAT12108.1};
GN ORFNames=RED65_03680 {ECO:0000313|EMBL:EAT12108.1};
OS Bermanella marisrubri.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Oceanospirillaceae; Bermanella.
OX NCBI_TaxID=207949 {ECO:0000313|EMBL:EAT12108.1, ECO:0000313|Proteomes:UP000004263};
RN [1] {ECO:0000313|EMBL:EAT12108.1, ECO:0000313|Proteomes:UP000004263}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RED65 {ECO:0000313|EMBL:EAT12108.1,
RC ECO:0000313|Proteomes:UP000004263};
RA Pinhassi J., Pedros-Alio C., Ferriera S., Johnson J., Kravitz S.,
RA Halpern A., Remington K., Beeson K., Tran B., Rogers Y.-H., Friedman R.,
RA Venter J.C.;
RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EAT12108.1}.
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DR EMBL; AAQH01000010; EAT12108.1; -; Genomic_DNA.
DR RefSeq; WP_007019068.1; NZ_CP051183.1.
DR AlphaFoldDB; Q1N1E2; -.
DR STRING; 207949.RED65_03680; -.
DR HOGENOM; CLU_017584_5_1_6; -.
DR OrthoDB; 6627771at2; -.
DR Proteomes; UP000004263; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd07377; WHTH_GntR; 1.
DR Gene3D; 1.20.120.530; GntR ligand-binding domain-like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR011711; GntR_C.
DR InterPro; IPR008920; TF_FadR/GntR_C.
DR InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR43537:SF42; GNTR FAMILY REGULATORY PROTEIN-RELATED; 1.
DR PANTHER; PTHR43537; TRANSCRIPTIONAL REGULATOR, GNTR FAMILY; 1.
DR Pfam; PF07729; FCD; 1.
DR Pfam; PF00392; GntR; 1.
DR SMART; SM00895; FCD; 1.
DR SMART; SM00345; HTH_GNTR; 1.
DR SUPFAM; SSF48008; GntR ligand-binding domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50949; HTH_GNTR; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000004263};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 10..77
FT /note="HTH gntR-type"
FT /evidence="ECO:0000259|PROSITE:PS50949"
SQ SEQUENCE 229 AA; 26300 MW; 962DB8974C6B4866 CRC64;
MDIEENAGTQ TLSDRVFEQI QEAIVSGEIP QGEKVSESGI GQRYGVSRGP LREAIRRLEG
RKLLVRIPHS GVRVVTLTHE ELIEIYQIRE SLEALACELA AENMSDNEIE ELGALLQQHQ
DYIHAHGGKR YYQQEGDWDF HYRIIHASGN KRLIDLLCGE LYQLIRMYRN KGSQSTSRPL
KAFEEHQQIF NALKQRDGEL AGILMGRHIR ASRRNIQDQI AEQINDQQK
//