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Database: UniProt
Entry: Q210B4_RHOPB
LinkDB: Q210B4_RHOPB
Original site: Q210B4_RHOPB 
ID   Q210B4_RHOPB            Unreviewed;       314 AA.
AC   Q210B4;
DT   18-APR-2006, integrated into UniProtKB/TrEMBL.
DT   18-APR-2006, sequence version 1.
DT   24-JAN-2024, entry version 101.
DE   SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABD89272.1};
GN   OrderedLocusNames=RPC_3737 {ECO:0000313|EMBL:ABD89272.1};
OS   Rhodopseudomonas palustris (strain BisB18).
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC   Nitrobacteraceae; Rhodopseudomonas.
OX   NCBI_TaxID=316056 {ECO:0000313|EMBL:ABD89272.1};
RN   [1] {ECO:0000313|EMBL:ABD89272.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BisB18 {ECO:0000313|EMBL:ABD89272.1};
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA   Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA   Hauser L., Pelletier D.A., Kyrpides N., Anderson I., Oda Y., Harwood C.S.,
RA   Richardson P.;
RT   "Complete sequence of Rhodopseudomonas palustris BisB18.";
RL   Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: NodD regulates the expression of the nodABCFE genes which
CC       encode other nodulation proteins. NodD is also a negative regulator of
CC       its own expression. Binds flavonoids as inducers.
CC       {ECO:0000256|ARBA:ARBA00003502}.
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|ARBA:ARBA00009437}.
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DR   EMBL; CP000301; ABD89272.1; -; Genomic_DNA.
DR   AlphaFoldDB; Q210B4; -.
DR   STRING; 316056.RPC_3737; -.
DR   KEGG; rpc:RPC_3737; -.
DR   eggNOG; COG0583; Bacteria.
DR   HOGENOM; CLU_039613_37_0_5; -.
DR   OMA; NAYYLVC; -.
DR   OrthoDB; 9793571at2; -.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd08432; PBP2_GcdR_TrpI_HvrB_AmpR_like; 1.
DR   Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR30537; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR   PANTHER; PTHR30537:SF74; HTH-TYPE TRANSCRIPTIONAL REGULATOR TRPI; 1.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
KW   Activator {ECO:0000256|ARBA:ARBA00023159}.
FT   DOMAIN          6..63
FT                   /note="HTH lysR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50931"
SQ   SEQUENCE   314 AA;  34512 MW;  433602C738A9E5B1 CRC64;
     MTARLPSLNG LRAFEAAARH LSFTSAAAEL NVTQTAISHQ IRRLEEELGI QLFVRQNRTL
     ALTPQARDYL PGVRAAFNDL RLATDRLLRK DAACVLTIST LASLAAKWLL PRLSAFQEAH
     PAIDVRITTS TALVDFRKGD VDAAIRYGRG QWPGLRADWL MADQLFPVCS PALLQGKKPL
     RSPQDLAEHS LLYSSGGYDD DWRLWLTAAG LPADISKQPG LSFDLIFMTV QAAIDGLGVA
     IGRTSYVEAD IAKGRLVVPF QIKLPDEWGF YLVSPEARAE TPKLSAFRQW LLASIPSQPP
     TSKADGDPVS RRDP
//
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