ID Q210B4_RHOPB Unreviewed; 314 AA.
AC Q210B4;
DT 18-APR-2006, integrated into UniProtKB/TrEMBL.
DT 18-APR-2006, sequence version 1.
DT 24-JAN-2024, entry version 101.
DE SubName: Full=Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABD89272.1};
GN OrderedLocusNames=RPC_3737 {ECO:0000313|EMBL:ABD89272.1};
OS Rhodopseudomonas palustris (strain BisB18).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Rhodopseudomonas.
OX NCBI_TaxID=316056 {ECO:0000313|EMBL:ABD89272.1};
RN [1] {ECO:0000313|EMBL:ABD89272.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BisB18 {ECO:0000313|EMBL:ABD89272.1};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M.,
RA Hauser L., Pelletier D.A., Kyrpides N., Anderson I., Oda Y., Harwood C.S.,
RA Richardson P.;
RT "Complete sequence of Rhodopseudomonas palustris BisB18.";
RL Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: NodD regulates the expression of the nodABCFE genes which
CC encode other nodulation proteins. NodD is also a negative regulator of
CC its own expression. Binds flavonoids as inducers.
CC {ECO:0000256|ARBA:ARBA00003502}.
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
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DR EMBL; CP000301; ABD89272.1; -; Genomic_DNA.
DR AlphaFoldDB; Q210B4; -.
DR STRING; 316056.RPC_3737; -.
DR KEGG; rpc:RPC_3737; -.
DR eggNOG; COG0583; Bacteria.
DR HOGENOM; CLU_039613_37_0_5; -.
DR OMA; NAYYLVC; -.
DR OrthoDB; 9793571at2; -.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08432; PBP2_GcdR_TrpI_HvrB_AmpR_like; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30537; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30537:SF74; HTH-TYPE TRANSCRIPTIONAL REGULATOR TRPI; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Activator {ECO:0000256|ARBA:ARBA00023159}.
FT DOMAIN 6..63
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 314 AA; 34512 MW; 433602C738A9E5B1 CRC64;
MTARLPSLNG LRAFEAAARH LSFTSAAAEL NVTQTAISHQ IRRLEEELGI QLFVRQNRTL
ALTPQARDYL PGVRAAFNDL RLATDRLLRK DAACVLTIST LASLAAKWLL PRLSAFQEAH
PAIDVRITTS TALVDFRKGD VDAAIRYGRG QWPGLRADWL MADQLFPVCS PALLQGKKPL
RSPQDLAEHS LLYSSGGYDD DWRLWLTAAG LPADISKQPG LSFDLIFMTV QAAIDGLGVA
IGRTSYVEAD IAKGRLVVPF QIKLPDEWGF YLVSPEARAE TPKLSAFRQW LLASIPSQPP
TSKADGDPVS RRDP
//